Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2021 |
Symbol | |
ID | 4258621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2382008 |
End bp | 2383936 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638122688 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_738067 |
Protein GI | 114047517 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0151437 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0679206 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGTAA TTACACTTCC TGATGGTAGC AAACGTGAGT TTGCACATCC CGTATCGACT CTCGATGTTG CCGCTGATAT CGGCCCTGGT CTTGCTAAAG CCTGTATCGC TGGTCGCGTG AATGGCGAAC TAAAAGACGC TTGCGATCTG ATCGAAACCG ATGCTGAACT TTCTATTATT ACCGCTAAAG ACGAAGAAGG TATTGAAATC CTTCGCCATT CTTGCGCGCA TTTATTAGGC CATGCAATCA AGCAATTATG GCCACAAACC AAGATGGCGA TCGGTCCTGT GATCGATAAC GGCTTCTATT ACGACATCGA TCTTGAGCAC AAGCTGACTC AAGAAGATAT CGAAGCCCTC GAAAAACGTA TGCTTGAACT GGCGAAAACC AATTACGACG TAGTCAAACG CGTTGTGAGC TGGCAAGAAG CCCGTGATAC CTTCGCCGCC CGCGGTGAAG AATACAAGAT CGCGATTCTG GATGAGAACA TCAGCAAAGA TGCGACTCCA GCGCTCTATC ATCACGAAGA ATACACCGAC ATGTGCCGTG GTCCACACGT GCCAAACATG CGTTTCTGCC ATCATTTCAA ATTGATGAGC ATTGCCGGCG CTTACTGGCG CGGTAACTCT GAAAACAAGA TGCTGCAACG TATTTACGGT ACTGCATGGG CTGATAAAAA AGCCCTGAGC ACCCATTTAG CCCGTCTTGA AGAAGCGGCT AAACGTGACC ACCGTAAGAT TGGTAAGCAG CTCGACCTCT ACCATATGCA AGAAGAAGCA CCAGGCATGG TGTTCTGGCA TAACGATGGT TGGAGCATCT TCCTTGAATT AGAACGTTTC ATTCGCCGTA AGTTAAATCA ATACACTTAC CAAGAAGTGA AAGGTCCCTT AATGATGGAC CGCGTACTGT GGGAACGTTC TGGTCACTGG GATAAATACT CAGAAGCCAT GTTCACAACC AGCAGTGAGA ACCGTGAATA CGCGGTTAAG CCAATGAACT GCCCAGGCCA TGTACAGATC TTCAACCAAG GCTTGAAATC TTACCGTGAT CTGCCATTGC GTATGGCGGA GTTTGGTTGC TGTCACCGCA ATGAGCCATC AGGTTCGCTG CACGGACTCA TGCGCGTACG TGGTTTTACT CAAGACGATG CCCATATCTT CTGTACTGAA GATCAAGTTC AAGCAGAAGT GAGCTCTTGT ATCCAAATGG TATACGACAC TTACTCGACA TTTGGCTTTG AAAACATCGT TGTAAAACTG TCGACTCGCC CAGAAAAACG TATCGGTGAC GATGCCATGT GGGACAGAGC CGAAGAAGCA CTCAAGCAAG CCTTACGTGC GAAAAACATC GAGTTCACCA TTTTACCGGG TGAAGGCGCC TTCTACGGTC CTAAGATTGA GTTCACGCTG CACGACTGTT TAGACCGTGC ATGGCAGTGC GGTACTGTGC AATTAGACTA CGCATTACCG AGCCGTTTAG GTGCAACTTA CGTCGCCGAA GATAACAGCC GTCAAACACC TGTGATGATC CATCGTGCGA TTTTAGGCTC GTTGGAACGT TTCTTAGGTA TTTTGATTGA AGAATACGCT GGTCGCTTCC CAACTTGGTT GGCCCCAATG CAAGTTGTCG TGATGAATAT CACCGACAAA CAGGCTGATT ATGTTGAAGA AGTGGTCAAA TTCTTCAAAG AACAAGGTAT TCGTGCCTCA TTTGACTTGA GGAATGAGAA AATAGGCTTT AAAATACGCG AGCACACCTT AAGGCGTGTT CCTTATTTAT TGGTCGTTGG CGATCAGGAA ATGGAAAATA AGGAAGTTGC GGTGCGTACA CGTGATGGAG TCGATTTAGG TAAGATGCGA ATCGAAGATT TCGCCGCCAA GATCCATCAA CAAATTTCGC TCCGTAGTCT CAAATTGTTG GAGGAATAG
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Protein sequence | MPVITLPDGS KREFAHPVST LDVAADIGPG LAKACIAGRV NGELKDACDL IETDAELSII TAKDEEGIEI LRHSCAHLLG HAIKQLWPQT KMAIGPVIDN GFYYDIDLEH KLTQEDIEAL EKRMLELAKT NYDVVKRVVS WQEARDTFAA RGEEYKIAIL DENISKDATP ALYHHEEYTD MCRGPHVPNM RFCHHFKLMS IAGAYWRGNS ENKMLQRIYG TAWADKKALS THLARLEEAA KRDHRKIGKQ LDLYHMQEEA PGMVFWHNDG WSIFLELERF IRRKLNQYTY QEVKGPLMMD RVLWERSGHW DKYSEAMFTT SSENREYAVK PMNCPGHVQI FNQGLKSYRD LPLRMAEFGC CHRNEPSGSL HGLMRVRGFT QDDAHIFCTE DQVQAEVSSC IQMVYDTYST FGFENIVVKL STRPEKRIGD DAMWDRAEEA LKQALRAKNI EFTILPGEGA FYGPKIEFTL HDCLDRAWQC GTVQLDYALP SRLGATYVAE DNSRQTPVMI HRAILGSLER FLGILIEEYA GRFPTWLAPM QVVVMNITDK QADYVEEVVK FFKEQGIRAS FDLRNEKIGF KIREHTLRRV PYLLVVGDQE MENKEVAVRT RDGVDLGKMR IEDFAAKIHQ QISLRSLKLL EE
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