| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2007 |
|---|
| Symbol | |
|---|
| ID | 4258693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 2370027 |
|---|
| End bp | 2370365 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638122674 |
|---|
| Product | DsrC family protein |
|---|
| Protein accession | YP_738053 |
|---|
| Protein GI | 114047503 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2920] Dissimilatory sulfite reductase (desulfoviridin), gamma subunit |
|---|
| TIGRFAM ID | [TIGR03342] sulfur relay protein, TusE/DsrC/DsvC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0202713 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.00031126 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGTAAATC CGCTTATATT CAATGGCGTC GAAATTGAAC GCGACCATCA AGGCTATTTG
AAAAATATCG CCGACTGGCA GCCGGATATG GCGCCGCTGT TAGCCCAAGA AGAACAGATT
GAACTGACCA GTGCCCACTG GGAAGTGATC CATTTTGTTC GAGATTTTTA TCTTGAATAT
AAAACCAGCC CTGCGATCAG GGTGTTAGTC AAAGCCATTG GTCTAGCCTT AGGGCCAGAT
AAAGGTAACT CTAAGTATCT CTATACCCTC TTTCCTGTTG GTCCTGCTAA ACAGGCGACA
AAGATTGCGG GCCTGCCTAA ACCTGCCAAG TGTATTTAA
|
|---|
| Protein sequence | MVNPLIFNGV EIERDHQGYL KNIADWQPDM APLLAQEEQI ELTSAHWEVI HFVRDFYLEY
KTSPAIRVLV KAIGLALGPD KGNSKYLYTL FPVGPAKQAT KIAGLPKPAK CI
|
|---|
| |