Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1992 |
Symbol | |
ID | 4256620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2356423 |
End bp | 2357370 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638122658 |
Product | glycoside hydrolase family protein |
Protein accession | YP_738038 |
Protein GI | 114047488 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3507] Beta-xylosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000493506 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000204974 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAAAAAGG CATTTTTGAG TGTGTGTTTG GCATTGAGTA CGAGTGTCAG CACTGCAGCG ATTGCTGCTA ACCCTCTGTT TACGGATGTA TTTACCGCCG ACCCTGCCGC CATAGTGCAC CAAGATACTG TCTATCTTTA TACTGGCCAT GACGTTGCAA AGGACAATCG CACCTTCTTC GAAATGCATG ATTGGCTCGT TTTTAGCTCT AAGGATATGC ACAATTGGAC GGCCCATGGC AGCAAGTTAT CGGTCAAGGA TTTCAGCTGG GCGAAAGGAG ATGCATGGGC TAGCCATGTG ATCGAAAAAG AAGGTAAGTT TTACTGGTAT GTCACGGCAA GGCACAACAA AATCAATGGT TTTGCTATTG GTGTCGCGGT TGCAGATAGT CCACTTGGCC CCTTCAAGGA TGCCCGCGGC AGCGCCCTTA TCACCAATGA CATGACCACA GATACCGAGA TTGATTGGGA TGATATCGAT CCTGCTGTCT TTATCGATGA TGACAAGCAA GCCTATCTGT TTTGGGGCAA CACTAAGCCA AGATTTGCCA AGTTAAAACC CAATATGATT GAACTCGATG GCCCAATACA CGCCATTGAT GTCCCTAACT TTACCGAAGC GCTTTGGGTA CATAAAAAAG ATAAAACCTA TTATCTTTCA TACGCTTCAG GCTTCCCTGA AAAAATTGCC TATGCGACCA GTGATAGCAT TCAGGGGCCG TGGAAGTACC AAGGCATCTT AAATGAAGTG GCGGGCAACT CGCCGACAAA CCATCAAGCG ATTATTGAAT TTAAAGGTAA ATCCTACTTT ATCTACCATA CCGGCGCATC GCAGGATGGC GGCGGTGAGT TTAGACGTTC AGTGGCAATT GACCCGCTGC ATTACAATGC CGATGGCACC CTACAGCGTA TTCATATGAC GAGTGAAGGC ATCAGCGAGC CGCAGTAA
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Protein sequence | MKKAFLSVCL ALSTSVSTAA IAANPLFTDV FTADPAAIVH QDTVYLYTGH DVAKDNRTFF EMHDWLVFSS KDMHNWTAHG SKLSVKDFSW AKGDAWASHV IEKEGKFYWY VTARHNKING FAIGVAVADS PLGPFKDARG SALITNDMTT DTEIDWDDID PAVFIDDDKQ AYLFWGNTKP RFAKLKPNMI ELDGPIHAID VPNFTEALWV HKKDKTYYLS YASGFPEKIA YATSDSIQGP WKYQGILNEV AGNSPTNHQA IIEFKGKSYF IYHTGASQDG GGEFRRSVAI DPLHYNADGT LQRIHMTSEG ISEPQ
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