| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1987 |
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| Symbol | |
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| ID | 4256615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2349976 |
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| End bp | 2351475 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638122653 |
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| Product | ABC transporter related |
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| Protein accession | YP_738033 |
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| Protein GI | 114047483 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.479214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000308121 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCTTA TTTTAGAACT CAAGCAGATC AGTAAGCATT ATCCGGGCGT CAAAGCCCTT
GAGGATGTGA GCTTACGGTT ATTTGCGGGG GAAGTTCACG CCCTATTGGG CGAAAACGGT
GCGGGTAAAT CGACGCTGGT GAAAGTGATG ACAGGCGCCC AGTCGAAAGA CATGGGCGAC
ATCCTTTTCC TCGGTGAGCC GCAACACTTC AACACACCAA TGGACGCGCA AAAGGCGGGG
ATCAGTACGG TTTATCAAGA GGTGAACTTA GTGCCTAACC TGACCGTGGC ACAAAACCTG
TTCCTCGGTT ACGAACCGCG CCGCCTTGGG CTGATCCATT TTAAAAAAAT GTATGCCGAC
GCGCGGGCCG TGTTAACCCA GTTCAAGCTG GATATCGATG TTAGCGCACC GCTGTCGGAT
TATTCCATCG CGGTGCAGCA ACTGATCGCC ATCGCCCGCG GCGTAGCCAT GTCGGCCAAG
GTATTAGTGC TCGATGAGCC TACCGCGAGC TTAGATGCCA AAGAAGTGCA AGTGCTGTTT
GGGATCTTAA ACCAGCTCAA AGCCAAGGGC GTGGCTATCG TCTTTATCAC TCACTTCCTC
GATCAGGTTT ATCAGATAAG CGATCGCATT ACCGTATTAC GTAACGGGCA GTTTATCGGC
GAATATCTGA CGGCAGAACT GCCACAACCT AAGTTGATTG AAGCCATGCT CGGGCGTTCT
CTGCAGGAGC AATTGGTTGA TAAACAGGAA AAGGAGCGCA CAGTCACCCG CGCTGAGGCT
GTGCTCTTGT CCCTCAAAGA TGTGTCGGTA AAAGGTTCAA TCCAATCGAT GAATCTCACC
GTGCCAAAGG GGCAGGCAGT TGGACTTGCG GGGCTGCTAG GCTCTGGGCG CAGCGAAGTC
TGCAACGCCG TTTTTGGGCT GGACTTGGTC GATAGCGGCA GTATTCATTT GGCTGGCCAG
AAATTGAATC TGTCACAACC CGTGGATGCA ATCAGCGCTG GAATCGCCCT GTGCCCAGAA
GATCGCAAGA TTGACGGCAT CATCGGCCCT TTATCGATTC GTGAAAACAT CATACTCGCG
CTGCAGGCGC GTATCGGTTG GTGGCGGTAT CTATCTAAAG CTCGGCAGCA GGAAATTGCC
CAGTTCTTTA TCGATAAATT ACAGATTGCA ACCCCAGATG CGGATAAACC CATAGAGCAA
TTGAGTGGTG GTAATCAACA GAAGGTGATC CTCGCGCGGT GGTTAGCCAT AGAGCCGATT
TTATTGGTAC TGGATGAGCC GACCCGCGGC ATCGATATTG GCGCTCACGC TGAAATCGTC
AAACTTATCA GAACCTTGTG TGATGAAGGC ATGTCGCTGC TTGTTGCATC GTCTGAGCTC
GATGAGCTCG TGGCCTTTTC AAATAAAGTC GTGGTATTAC GCGACAGATA CGCAGTACGT
GAACTTTCAG GAGCGGAATT AACCTCGCAA CACGTAATGC AAGCGATTGC GGAGGGATAA
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| Protein sequence | MSLILELKQI SKHYPGVKAL EDVSLRLFAG EVHALLGENG AGKSTLVKVM TGAQSKDMGD
ILFLGEPQHF NTPMDAQKAG ISTVYQEVNL VPNLTVAQNL FLGYEPRRLG LIHFKKMYAD
ARAVLTQFKL DIDVSAPLSD YSIAVQQLIA IARGVAMSAK VLVLDEPTAS LDAKEVQVLF
GILNQLKAKG VAIVFITHFL DQVYQISDRI TVLRNGQFIG EYLTAELPQP KLIEAMLGRS
LQEQLVDKQE KERTVTRAEA VLLSLKDVSV KGSIQSMNLT VPKGQAVGLA GLLGSGRSEV
CNAVFGLDLV DSGSIHLAGQ KLNLSQPVDA ISAGIALCPE DRKIDGIIGP LSIRENIILA
LQARIGWWRY LSKARQQEIA QFFIDKLQIA TPDADKPIEQ LSGGNQQKVI LARWLAIEPI
LLVLDEPTRG IDIGAHAEIV KLIRTLCDEG MSLLVASSEL DELVAFSNKV VVLRDRYAVR
ELSGAELTSQ HVMQAIAEG
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