Gene Shewmr7_1978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1978 
Symbol 
ID4256606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2336837 
End bp2337592 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content52% 
IMG OID638122644 
Producthypothetical protein 
Protein accessionYP_738024 
Protein GI114047474 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00063204 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00218307 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATACCG CCTGGTTCGA CTTTACGCTG ATCCCTATCG ATATATTCAC GCTGTTAACC 
TTAGCCTCGG CCTTTACTGC ATTTTTTACC GCCTGCTTCG GGATTGGTGG TGGCGTAATG
TTATTAGGCG TGATGGCGCA AGTCCTTCCG CCTCAAGTAA TTATTCCCCT CCATGGCGTG
GTGCAATTAG GCTCGAATCT GGGCCGCGCC CTATTAGGTT GGCAGCATGT GCAGTGGTGG
CTTATCAGTC GTTTCTTACC TGGCGCGCTC GTTGGCGCCG CCTTGGGGAG CTTAGTGTTA
GTCGCATTGC CGCCAAAGGT CATGTACCTC ACCATCGCCC TGTTTATTTT GTATTCCTGC
TGGGGACCGA AAATCCCCCG CGTGGTGCTG GGAACAGCCG GGACGATAAT CGCTGGTGCG
TTAACAACCT TTATCTCGTT ATTTGTCGGC GCGACAGGTC CCTTAGTAGC TGCCTTTATC
AAACAATTAG ACGTTGACCG TTTTCGCACT GTCGCGACCT TTGCGATGGC GATGTCACTG
CAACATGGCG TCAAAATTCT CGTTTTTGAG GGGCTGGATA TTCCTATCCT GCCGTGGTGG
CCGCTGCTAC TCTGCATGAT TTTAAGCGGC GCCTTGGGAA CCTGGCTTGG CTTTAAGATG
TTAGCGCGGG TGACGGATAA ACATTTCAGC GTCGCCTTTA ATTGGGTGCT GACACTGCTG
GCGATACGTT TATTGTGGCA GGCTATGATG GGATAA
 
Protein sequence
MHTAWFDFTL IPIDIFTLLT LASAFTAFFT ACFGIGGGVM LLGVMAQVLP PQVIIPLHGV 
VQLGSNLGRA LLGWQHVQWW LISRFLPGAL VGAALGSLVL VALPPKVMYL TIALFILYSC
WGPKIPRVVL GTAGTIIAGA LTTFISLFVG ATGPLVAAFI KQLDVDRFRT VATFAMAMSL
QHGVKILVFE GLDIPILPWW PLLLCMILSG ALGTWLGFKM LARVTDKHFS VAFNWVLTLL
AIRLLWQAMM G