| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1977 |
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| Symbol | |
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| ID | 4256605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2333852 |
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| End bp | 2336662 |
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| Gene Length | 2811 bp |
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| Protein Length | 936 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638122643 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_738023 |
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| Protein GI | 114047473 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00176483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00353487 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTAAAC AGACTTATTT GGCAAGCGCT ATTCTGCTTG CTCTTGCTAG TCAAGCGACT
TATGCGGCAG AAGCTGAAGC GACACAATCG CCTCAGGCAG AAGAAACGGC TCAGCCCTCT
TCTGGCGGCA AAGCGCAAAA TAATAATGAA GAGATGGAGA TCATACAGGT TCAGGGGATC
CGCGGTAGTT TAAATAAAGC GGTAGAACTT AAACGTCAAA ACATTCAAGT TGTCGATGCC
ATCGTTGCCG AAGATATTGG CAAATTCCCA GATAATAACG TGGTTGAAGC CTTACAACGG
GTAACCGGTG TTCAAGTGAC TGACCGCGCG TCTGGTGAAG CGAATGTTGT CAGTATTCGT
GGTTTAACGG ATGTGACGAC CACAGTGAAC GGCCGCCAAA TCTTCACCGC AACGGGCCGC
TCAGTTGCGA TCGCCGATAT TCCCGCCGCA CTGCTTGGCA GTGTTGAAGT CTTTAAAACC
CGTTCTTCTT CTCAAGTGGC CAGCGGTATC GCAGGTCAAA TTGATATCCG CACCCATAAG
CCTTTCGATT TTGAAGACAG TAAAGTCTCT GTTGCTGCTA AAGGCATCTA TTCAGACCAA
CCCGATACTA TCGACCCTAA TTTCAGTGCA TTAGCAAGTA ATCGTTGGGA TACCAGTATT
GGTGAAGTGG GCGCTTTAGT TAACGTGTCT TATATCCGCA CTAACTATAA AGATGAAAGT
GTCTCACCTG GTGCATCCTT CCCCTACTTT GTTGAAGATG GTACTCGCAT TACCAGTGGT
TGGAACGTGG GTTCTGCCCA TGGTATCGAT ACCAGCGCTG GCGCCACCAT CGATGGCAAA
GAATATTTAC TGGCTCGCGA TGCCATGTTT GGCAACATTC TCGAGGGCGA GCGTGAACGT
CCTGCGTTTA ATATCTCATT GCAATGGGCG CCAAATGATA GCTCTGAATA CACCTTCGAA
GCCTTCTACA ATGGCTATCG CAATGAAAGT TTTAACTCAA TGTTGTTTAG TTTTGTTGAT
TCTCCTGCGA ACTGGCAGCA AGTGATCCAG GATGGGATTG AAGTGTACGA TGGCACCAAT
GTGGTGAAAT CGCGCACCGC ATACAATGCC TACAACTTCA CCAGTGGCGA TCACTCTAAA
GCCAGCACAG ATAGCTATGT CTTTGCCTTA GGGGGTAAAT GGGACATTAC CGACGAGTTC
CAATTAAAGT CGGAAGTGGT TTATCAACAG AGTACCTATG AGAATGAATT TACAGCAATG
CGCGGTGATG CCACGGTTTA TGGTGTCGAG ATTGATGCTA ATGCTGACGA TGGTATCCCA
AGCTGGAGTT ATTTAGATAA TCCCGATACC GTACTCGATG AGTCAGACAT GACAAATCCA
GATCTATGGC AAACAGCTGA TTTCTTTGAT AATGGCAGCA AAGACGAGGG TGATTCCTTG
TCTTGGACAA TGGATGGCAG CGTGTATGTG GATTATGCCA TTTTCACTAA AGTGCAATTT
GGCGCTCGTT ATGAAAAACG TGGCGCTACT AACTTCAGCC GCACTGTCAG TAGCGCTAAG
AAAATTGCCT ATACTGATTT AGATCCTTCC ATGTATATGG TGACATCGGG CTTCTTTGAA
GGCCGCGCGA ATGTGCCTGA TTCATGGGCA GTAATCAATG GTTATAACCT ATACAAAAAC
CGCAGTGAGT TTGAAAAGCT TTGGGGCTTC GAAGCCAGAA AGTTACAACT CATGAAAACC
TTTGATATCT CTGAACAAGC TTGGGCTGGC TACCTGATGG CCGACTTTGA TACTGAAGTC
TTTGGTAAGC GTTTAGATGG TCAAATGGGT GTTCGCTACG AAGGCACGAA AGCGGATATG
GACTTCTTTG ACAATGATGC CAAAGACGCT AATGGCAATG TTTATACCGC CATTAGCAGC
GACACCACTG ACAGCTCAAA ATTGTTACCT AGTTTAGTGA TGCGTTACTG GTTAACGGAT
GATTTTGTTG CGCGTTTCGC CTATACCGAA ACCATTCGTC AACCCGCCTT TGCTGATCTG
AACTCTTTCA CCTATTACGT ACCTGACTTA TCTAAGACGA ATTATGGTTC TGCCAGTGGT
GGTAATCCTG ATTTAGAGCC TGTGACCTCT AAAAACTATG ACTTCACCCT CGAGTACTAT
TTTGGGAATG GTAATTCGAT TTACGGTACT TATTTCCGCC GCGATATTGA AGGTTTAGTA
TATAACTCTC TATCGACCAC GCTCTACGAC TATGATGGCG ATGGAGTAGA TGAAACCTAT
ATCCTAAGTC GTCCTGGTAA CACTTCTAAC GGTAAGTTAA CCGGATTCGA GTTAGGTGCA
GTGTACTTCC CCGAAGGATT ACCTAGTCTG TTAGACGGTT TAGGCGCTCA GCTTAGTGGG
ACACTGCTGG ATTCTTCACA GGATATTCCT GAATATAACA CAGGGACGGG TGAGCGAATT
GGTGTTACGA CCCGTGATAT GTTTGGGGTA TCCGATGAGT CTTATAGTGC CGTGTTGATT
TACGACAAAG ATTTCTTCAG CGCGCGTATG TCTTATACCT GGCGTAGTGA GTTCTTAAAC
GCCTATGATG CTCCTAACTT TGCCATGCCT CGCGGTATCT ATCGTAAGCC GGAGCAGTCA
TTGGACTTCC AATTAAGCTA CAACATCAGC GATGACTTAG TCGTGAGCTT CGATGCGACT
AACCTGCTGG ACGATGTATA TCAGGAATAC TATGAGGATT CGACCCTATT CAACCGTACG
AACAATATCT TCACTCGTAC CTTTGCTCTG GGCGTTCGTT ACTCCTTCTA A
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| Protein sequence | MFKQTYLASA ILLALASQAT YAAEAEATQS PQAEETAQPS SGGKAQNNNE EMEIIQVQGI
RGSLNKAVEL KRQNIQVVDA IVAEDIGKFP DNNVVEALQR VTGVQVTDRA SGEANVVSIR
GLTDVTTTVN GRQIFTATGR SVAIADIPAA LLGSVEVFKT RSSSQVASGI AGQIDIRTHK
PFDFEDSKVS VAAKGIYSDQ PDTIDPNFSA LASNRWDTSI GEVGALVNVS YIRTNYKDES
VSPGASFPYF VEDGTRITSG WNVGSAHGID TSAGATIDGK EYLLARDAMF GNILEGERER
PAFNISLQWA PNDSSEYTFE AFYNGYRNES FNSMLFSFVD SPANWQQVIQ DGIEVYDGTN
VVKSRTAYNA YNFTSGDHSK ASTDSYVFAL GGKWDITDEF QLKSEVVYQQ STYENEFTAM
RGDATVYGVE IDANADDGIP SWSYLDNPDT VLDESDMTNP DLWQTADFFD NGSKDEGDSL
SWTMDGSVYV DYAIFTKVQF GARYEKRGAT NFSRTVSSAK KIAYTDLDPS MYMVTSGFFE
GRANVPDSWA VINGYNLYKN RSEFEKLWGF EARKLQLMKT FDISEQAWAG YLMADFDTEV
FGKRLDGQMG VRYEGTKADM DFFDNDAKDA NGNVYTAISS DTTDSSKLLP SLVMRYWLTD
DFVARFAYTE TIRQPAFADL NSFTYYVPDL SKTNYGSASG GNPDLEPVTS KNYDFTLEYY
FGNGNSIYGT YFRRDIEGLV YNSLSTTLYD YDGDGVDETY ILSRPGNTSN GKLTGFELGA
VYFPEGLPSL LDGLGAQLSG TLLDSSQDIP EYNTGTGERI GVTTRDMFGV SDESYSAVLI
YDKDFFSARM SYTWRSEFLN AYDAPNFAMP RGIYRKPEQS LDFQLSYNIS DDLVVSFDAT
NLLDDVYQEY YEDSTLFNRT NNIFTRTFAL GVRYSF
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