| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1976 |
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| Symbol | |
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| ID | 4258121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2329899 |
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| End bp | 2333264 |
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| Gene Length | 3366 bp |
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| Protein Length | 1121 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638122642 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_738022 |
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| Protein GI | 114047472 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00565193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00420486 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTGCTTA AACGCTCATT CGTGTCAGCA AGCTTGATCA TGGCACTAGC CTCCTGTGGT
GGGGACGACA GCAGCTACAG TGCGAACGAC ACAAATACCT TTACCCCTCC CGCCCCTGCG
ACATCGGCAG ACCCAACAAT TGCAGGTGAG GTGAGCTACA AAAATGCAGT AGTTCATGAT
CCTTCCATCA TTAAAGATAC CGATGGCACC TATTATGTTT TCGGATCCCA CTTGGCGGTG
GCCAGTTCTA CCGACTTGAT GAACTGGACA CAAATTGCCT CGGATGGTGT ACCCGAGAGC
AGCCTGTTTA ATACCTATGA GTCAGAAATC GCGGAAGGCA CTGCATGGAC GGGTGGCTTT
GTTGGTTCGT GGGCACCGGA TGTGATAAAG CTTGCCGACG GTAAGTACCA TTTCTATTAC
GACTTCTGTG GCGGCCCCGA TAAGATTGAT TGCGTATCGC GCTCCTATTT GGGGATGGCC
ACCTCGGACA ATATTTTAGG CCCTTATGTT AACCAAGGCT TGATCCTGAA ATCAGGTCAT
GAGGGGGCTG AAAACCCTGG CGCAAACGGT CAAATTTACG ATGGCTTTGT CGACCCTAAC
GCTATCGATC CAGCCGTGTT TTACGATAAA GATGGCGGCC TGTGGATGAC CTATGGTTCC
TATTCCGGCG GGATCTGGGT GATGCAGTTA GATCCTGCGA CGGGTTTACC ATTAGAAGGC
CAAGGTTACG GTACTAAGAT CATGGGCGGC AATTATAGTG CCATCGAAGG TTCTTACGTC
ATCTATAGCC CTGAATCCGA ATACTATTAT ATGTTTACCT CCTTTGGCGG CTTCGCCCAA
AAAGACGGTT ACAACATTCG TATCTCTCGC TCTAAAAATC CTAACGGTCC CTATGTCGAT
GCTGCGGGTC TGGACATGAT TGGCGCAACG GCTGCCGGCA ATATCGCCGA CTATGGCGTC
AAACTGATGG GCGGTTTCCA ATTTGTGGCC CACCCTGGCG ATGTGGGACA TGATCACGGT
TACCTGTCAC CCGGCCACAA CTCCGCTTTT TATGATGCAC AAACGGGCAA ATACTTCTTA
GTATTCCATA CGCGCTTCCC CGATACCGGC GAAGGTCACA GCGTGCGCGT GCATGAGCTA
TTTCTCAACA GCGATGGTTG GCTAGTTGCC TCACCACAGC GTTATGCACC GATCAACGGC
GATAACATTG TCGATGAAAT CGATGTCACT GGTGATTATC AATTTATTAA TCACGCAAAA
AATATCAATA CGGCGGCGCA CACCTCCCTG CATATTAAGT TATCCCGTAC TTGGACCAAT
AAAGGCAGTG TGTCTGGCGA TGTGACTGGT ACTTACCAAC AGGGCGATGA CAACCAAATC
ACCTTAATGC TAGACAATTT AGGCACTTTT GAAGGCGTAC TCGCCTGGCA ATGGGATCCT
GAACAAAACA AACTCATGCC AACCTTTAGC GCCATTTCTA ATGATGGGGT GAGTATTTGG
GGCGTGAAGC TCACCGATAA CACCACTGAG GAAATTTTAT CGGCATCGGC AAACGGCATT
AGCCTGCCGA CCGAAGTCAC CGAAGGCACG CTCGCCTTGC CGACACAAGG TACTCGTGGA
TCAACTATCG AGTGGCAATC GAGCGACGAG TCAGTGATCC GTGCCGATGG CACCATTATC
CGACCCAACG TGGGCGAGGG CGATAAGGTC GTGACCTTAA CCGCGACAAT TATGGTCAAT
GGTAAAAAGG TGACTAAAAC CTTCCAAATT ACCGTATTTG CCCATAAAAC CTATAACCGT
ATTGCCCAGT ACAGCTTCGA GAATAACCTC AAGGATTCCT TAGGCTTATT TGGTGATGGT
CAGCCCACTG GCGATAGGAT CTTCAAAGCG GGTGATACCA TTGGCTACGC CACAGGCTTT
GAAGGACAAG CCCTATCATT AGATGGTGCC CACGGAGTGT TACTGCCATC GGGCATTATC
TCCAGCTACG AGTACACAGT GTCTTTCTGG GCAAGTCCTG CGGTTATCAC AGGATTTACC
ACGGCATTCT TCGGCGCAGT TAACGAGCAA ACCGCTGAAG ATGCTAGTAA GTTCTCCAAT
ACTTGGGTCA GCTTGCTGCC ACAGGGCTGG GACGGTAATA CCATGTTCTG GAGCCATAAT
ATCGATACCA GTGGCAGCTC AGTGCTGGAG ACCTGGTTTG ATGGTGTCAC CGGTGAGCGC
ATCGCTGAAA ACACTTGGTC GCATCTGGCG TTCTCCGTCA ATAAAGGGCT AGTTAAAGTC
TTTATCAACG GGGTTGAGCG TTTTAGCAGC GGTAACCTTG CCAACTACTT TACGGGAGCT
CAGGGCGTTT TCGGTCTTGG GGTTAACTAC TGGGATGTCC CATACAATGG CCTTATTGAT
GAGCTGAAGG TATATGAAGC GGCATTAACG GCTGAAGAAG TCAAAGCCCT CGATATCGAC
AAGTTAGCCG ACAGTGAACT CTTGTCCTCA GCAACGGCCA TTCTGGAGCT AGGCGACTTA
TCGGCGGTGC GTGAAAATAT CGAACTGCCA GTAACGGGTC CTTATGCTTC GGCAATTACT
TGGGTCTCTT CCGATCCAAC CATTATCGAT ACCCGCGGCA CGGTCAATCA GCCAGGCCGT
GAGGAAACCG ATAAGGTGGT GACCCTCACG GCGACCTTAA AACTCGGTCA AGCGACGCAG
ACGAAAGTCT TCACCGCCAC CGTTAAGTCT AAGGCGCCGC CAACACCAGT CGCAGTCTAC
AGCTTTGAAG AAAATCTTAA CGACAGTACC GCTAACTTCG GCGCGGGCAC TGTAGTGGGT
AACCTGATTG GCGTTGAAGG CGGTAAAATC AGCTATGTGG ATGGCGCGGT AGGCAAGGCG
GCGGTCTTTG ATGGTGCCTC AGGTATTGTA TTGCCGAATA ACCTTATCAA AGACTACACC
TATTCAGTGT CAATGTGGCT CAACCCTGAG CAGCTGAATA AGTACACTAC AGCCTTGTTT
GGTTATGCGA CTGATTCTAG CTGGACCAGC GTCTTACCAG GCGGTCAAAA TGATTATGAG
CGCATGGTGT TATGGTCAGG CACAGCATGG TACGACGGTA GAACCGGTTT TGTGATGCCA
AAATCCCAAT GGACGCACCT GGCGTACACT GTAAATGGCG GCGATGTGAA GGTCTATATC
AATGGTGAAT TGAAGTTTAC CGGCGCTAAC TTCCCGAACA TCTTCTCAGT ACCGACCACT
AAGTTTGCGG TCGGGGTCAA CTTCTGGGAT ACGCCTTTCA AAGGGGCAAT CGATGAAATC
AAGTTCTATG ATGAAGCGAT TACTGAACAA GATGTAGCTG ATTTATTTGG CGAATCTAAT
CAATAA
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| Protein sequence | MVLKRSFVSA SLIMALASCG GDDSSYSAND TNTFTPPAPA TSADPTIAGE VSYKNAVVHD
PSIIKDTDGT YYVFGSHLAV ASSTDLMNWT QIASDGVPES SLFNTYESEI AEGTAWTGGF
VGSWAPDVIK LADGKYHFYY DFCGGPDKID CVSRSYLGMA TSDNILGPYV NQGLILKSGH
EGAENPGANG QIYDGFVDPN AIDPAVFYDK DGGLWMTYGS YSGGIWVMQL DPATGLPLEG
QGYGTKIMGG NYSAIEGSYV IYSPESEYYY MFTSFGGFAQ KDGYNIRISR SKNPNGPYVD
AAGLDMIGAT AAGNIADYGV KLMGGFQFVA HPGDVGHDHG YLSPGHNSAF YDAQTGKYFL
VFHTRFPDTG EGHSVRVHEL FLNSDGWLVA SPQRYAPING DNIVDEIDVT GDYQFINHAK
NINTAAHTSL HIKLSRTWTN KGSVSGDVTG TYQQGDDNQI TLMLDNLGTF EGVLAWQWDP
EQNKLMPTFS AISNDGVSIW GVKLTDNTTE EILSASANGI SLPTEVTEGT LALPTQGTRG
STIEWQSSDE SVIRADGTII RPNVGEGDKV VTLTATIMVN GKKVTKTFQI TVFAHKTYNR
IAQYSFENNL KDSLGLFGDG QPTGDRIFKA GDTIGYATGF EGQALSLDGA HGVLLPSGII
SSYEYTVSFW ASPAVITGFT TAFFGAVNEQ TAEDASKFSN TWVSLLPQGW DGNTMFWSHN
IDTSGSSVLE TWFDGVTGER IAENTWSHLA FSVNKGLVKV FINGVERFSS GNLANYFTGA
QGVFGLGVNY WDVPYNGLID ELKVYEAALT AEEVKALDID KLADSELLSS ATAILELGDL
SAVRENIELP VTGPYASAIT WVSSDPTIID TRGTVNQPGR EETDKVVTLT ATLKLGQATQ
TKVFTATVKS KAPPTPVAVY SFEENLNDST ANFGAGTVVG NLIGVEGGKI SYVDGAVGKA
AVFDGASGIV LPNNLIKDYT YSVSMWLNPE QLNKYTTALF GYATDSSWTS VLPGGQNDYE
RMVLWSGTAW YDGRTGFVMP KSQWTHLAYT VNGGDVKVYI NGELKFTGAN FPNIFSVPTT
KFAVGVNFWD TPFKGAIDEI KFYDEAITEQ DVADLFGESN Q
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