Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1975 |
Symbol | |
ID | 4258120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2328939 |
End bp | 2329790 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638122641 |
Product | hypothetical protein |
Protein accession | YP_738021 |
Protein GI | 114047471 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0979714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00214562 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCCTAT TTCGTCTATT TACGCTGACA ACGCTCACCA TGTTGGCCTT TGCCTGTAAC TCGATACTTT GCCGGCTTGC GCTAAAGGAT GGCAGTATCG ATGCGGGCAG CTTTACCCTG ATCCGGTTGT TATCGGGTGC CATCATGCTC TGGCTATTAA GCCTCAACAA ACCTGCTCAG GAGGCCAAGG GCCATTGGGG CTCAGCCTTG GCATTGTTTG TCTACGCAGC GGGATTTTCC TACGCCTATA TCAATATGAC GGCCTCAATG GGCGCGCTGT TACTCTTTGG CGCCGTACAA GCCACCATGA TTGGCTATGG GCTGTACCGA AAAGAAACCT TTAATACCAG ACAATGGCTT GGATTGGCCT GCGCCGCTGC CGGTTTGATT TTTCTGCTGT TACCTGGGCT GTCGGCGCCG CCGCTACTGA GTTCATTGCT GATGATAAGC GCTGGAGTCG CTTGGGGGAT TTATTCGATA AAGGGCAGGG GAGCCAAGCA TCCGATTCCA ATCAGTGCAG GCAACTTTAT CCGCACTGTA CCGATGGCAC TGTTATTACT GTTAGTAGTT CGAGATCCCT TAATGGTAAG TCAGATGGGG ATTATCTATG CGTTAGCCTC GGGCGCCATC GCTTCAGGCT TAGGTTATGC GATTTGGTAT TCCATTTTAC CTTTATTGTC ATCCACCTAC GCCGCCACTG TACAATTGAG TGTGCCGTTA ATTGCCGCCG TTGGCGGAGT GCTATTACTG GATGAACCTC TAAGCCTTCG ATTATTGCTA GCCTCCGGTG CCATCCTCGG TGGCATTGCA CTGGTTGTCC TCAGCAAATC TGCACCACAA AATAAAAGCT AA
|
Protein sequence | MTLFRLFTLT TLTMLAFACN SILCRLALKD GSIDAGSFTL IRLLSGAIML WLLSLNKPAQ EAKGHWGSAL ALFVYAAGFS YAYINMTASM GALLLFGAVQ ATMIGYGLYR KETFNTRQWL GLACAAAGLI FLLLPGLSAP PLLSSLLMIS AGVAWGIYSI KGRGAKHPIP ISAGNFIRTV PMALLLLLVV RDPLMVSQMG IIYALASGAI ASGLGYAIWY SILPLLSSTY AATVQLSVPL IAAVGGVLLL DEPLSLRLLL ASGAILGGIA LVVLSKSAPQ NKS
|
| |