Gene Shewmr7_1970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1970 
Symbol 
ID4258115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2323506 
End bp2323991 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content42% 
IMG OID638122636 
Producthypothetical protein 
Protein accessionYP_738016 
Protein GI114047466 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000508823 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00854934 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTAACAT CTTGCATCAC AAGGTTAATT TTTGTGCTTA TTCGCAAACT TCTCCCACTC 
TCTCTCATGC TAGTTATGGT TAATCTCGCA GCTTGCAATG AAAAGACCAC GCAACAGATA
AAAACAATGC CCGCTGACCC GACACTTTGT GCCTTTACAC AGGGGGATTG TATTAAACGC
ATTGGCGATT TAGAGCTGAG TATTAGTCTA ACACCAGCGC ATGCACCGAG CGAAAAACCA
TTAACATTGA AGCTATTATC ATCTGATGCT ATCGATAACC TTCAGATCCG TTTAGAAGGT
AGAGATATGT TTATGGGGGT TATTCCAGTT AATCTTCGTG AAATAAACAA AACCAGCTAT
GAAGGCCAGA TGATTTACGG CGCTTGCAGT AGTGGATACA TGGTATGGCG AGGATTTGTC
CGTTTTAGTC GAAACGGTGT AGAACAAGCC GTTGTTTTTG ACTTTCTCGC CGATAATCCC
AGTTAA
 
Protein sequence
MLTSCITRLI FVLIRKLLPL SLMLVMVNLA ACNEKTTQQI KTMPADPTLC AFTQGDCIKR 
IGDLELSISL TPAHAPSEKP LTLKLLSSDA IDNLQIRLEG RDMFMGVIPV NLREINKTSY
EGQMIYGACS SGYMVWRGFV RFSRNGVEQA VVFDFLADNP S