Gene Shewmr7_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1962 
Symbol 
ID4258107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2316121 
End bp2316813 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content50% 
IMG OID638122628 
Producthypothetical protein 
Protein accessionYP_738008 
Protein GI114047458 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00784562 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATTGAAT ATAACGTCAC AGGGGCATTT CTGGTGGGAT TAATGGGCGC AGCCCATTGC 
TTTGGCATGT GTGGCGGTCT CGTTGGCGCC TTTTCCTCCC AGCTTCCGAA TCCTAAACAA
GGCAATCACT TAGCCCATCA ACTCACCTAT TTATTAAGCT ATAACCTCGG CCGGATATTA
AGTTATACCC TCGCAGGTGC CTTAGTCGGC GGTTCGTCGG CCATGCTTGG GCACTTATTT
GAACTCGACA GTTACCTGTT AATCCTAAGG ATCATTGCTG GCGTGATGAT GATTGCAACC
GGGCTTTACA TTGCAAAAAT CTGGGTGGGT ATAGTGCAGA TTGAGCGCCT TGGTCAAGTG
TTATGGCGTT ACCTAAAACC CTTAGCCCAA CGCCTTGTGC CCATCACAAC ACCAATGCAG
GCCATCACCG CCGGACTGAT TTGGGGCTGG CTACCCTGCG GCTTGGTATA TAGTACCTTA
ACCTGGTCGG TGGCGGCAGG CTCTGCCAGC CAAGGCGCCT TGATTATGTT CGCCTTTGGA
TTAGGGACAC TCCCAGCGCT CCTGAGTGCC GGTGTTGCGG CCAAACGTTT AGCCAATTGG
GTACAGCAAA AAACCGTTAG ATTATTGAGT GGCTTACTTT TAATTGCCTT TGGCGCACAA
ACTTTATATA TCGCCCTGTC GCAGCTAAAC TAG
 
Protein sequence
MIEYNVTGAF LVGLMGAAHC FGMCGGLVGA FSSQLPNPKQ GNHLAHQLTY LLSYNLGRIL 
SYTLAGALVG GSSAMLGHLF ELDSYLLILR IIAGVMMIAT GLYIAKIWVG IVQIERLGQV
LWRYLKPLAQ RLVPITTPMQ AITAGLIWGW LPCGLVYSTL TWSVAAGSAS QGALIMFAFG
LGTLPALLSA GVAAKRLANW VQQKTVRLLS GLLLIAFGAQ TLYIALSQLN