| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1960 |
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| Symbol | |
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| ID | 4258105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2314238 |
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| End bp | 2315170 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638122626 |
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| Product | universal stress protein UspE |
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| Protein accession | YP_738006 |
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| Protein GI | 114047456 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00778314 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGGATT ATCAAAAAAT ACTGGTAGTA GTCGATCCCA CGACGGAGCA TCAAGTTGCA
CTCGCCCGTG CTGTGACCTT GGCCAGTAAA AGTAACGCCC ATGTGACTGT GTTTCTCTCT
ATTTTTGACT TTTCCTACGA AATGACATCG ATTCTATCGA GCCAAGAGCG CGAAGCCATG
CGACAAGGTG TGATTGATCA GCGTCTGGCG TGGATCCAAG ATCTGCTGAC CGCCTATAAC
CACCTGCAAC TCGATATTGA TACTCAAGTT ATTTGGCACA ATCGCCCATT TGAAAGCATT
ATCAACCATG CGATTGCTGG GCAATATGAT TTGATCGTCA AAGGCACCCA TGCCCACGAC
AAGTTAAAGG CCGTCATTTT TACTCCAACC GATTGGCATT TAATGCGTAA AGCACCAGTG
CCTGTGTTGA TGGTTAAAGA TCATGATTGG CCAGAAGCGG GTAAAATCCT CTGCGCCGTC
AACGTGGCAA CCGAAGATAC CGATCATCAG ATGCTAAACG GCAAGATTAT CGAACATGCC
AAGGATTTAG CCGCAAAATT TGCCGCCGAA GTGCACTTAG TCAATGGTTA TCCCGGCACA
CCGGTGAATC TTGCCATTGA ACTGCCCGAT TTCGATGCAC AAACCTATAA CGACACCATT
CGCATGCAAC ATGAGCAACG AGTGCAGTAC CTTGCCAATG CCTATGGTAT CGATACCCTG
CACTGCCATG TGAAAGAAGG CTTACCAGAG GATGTGATCC CTGAGCTTGC CGAGCAACTC
GATGCCGAGC TGGTAATTTT AGGTACTGTC GGTCGGACTG GATTCTCAGC GGCGCTTATC
GGCAATACCG CAGAGCATGT GATCGATAGC ATTAACTGTG ATTTGTTAGC CATCAAACCC
GATGGTTATA AATCGCCGCT TGAAGAGGCA TAA
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| Protein sequence | MKDYQKILVV VDPTTEHQVA LARAVTLASK SNAHVTVFLS IFDFSYEMTS ILSSQEREAM
RQGVIDQRLA WIQDLLTAYN HLQLDIDTQV IWHNRPFESI INHAIAGQYD LIVKGTHAHD
KLKAVIFTPT DWHLMRKAPV PVLMVKDHDW PEAGKILCAV NVATEDTDHQ MLNGKIIEHA
KDLAAKFAAE VHLVNGYPGT PVNLAIELPD FDAQTYNDTI RMQHEQRVQY LANAYGIDTL
HCHVKEGLPE DVIPELAEQL DAELVILGTV GRTGFSAALI GNTAEHVIDS INCDLLAIKP
DGYKSPLEEA
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