Gene Shewmr7_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1957 
Symbol 
ID4258382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2311706 
End bp2312518 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content44% 
IMG OID638122623 
Productbax protein, putative 
Protein accessionYP_738003 
Protein GI114047453 
COG category[R] General function prediction only 
COG ID[COG2992] Uncharacterized FlgJ-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00816539 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAAAACAG GTAGAATTGG TTCGTTTACA CTCGCGTTAG CCCTAGTGAT CTTAGCGATT 
TTTTCGCTGA GAGTCTGGCT CATTCCTACA ATTGATGAGC CTGAATCTAT CGTTAAGCAA
CTGGAAAACT CCGTTGACCC CGTTACTCAA GTGCCTGACT TTTCTGCTAT CAATGATGTG
GCGGAAAAAA AGCGTGCCTT TTTTGATTTT CTCAGGCCGA TCATTCAACA GCAAAACGCC
ATTATTGCCA CCGAGCGTGA CTTTATCACC GACATGTTGG CCTTAGTGGA GAACGACAGC
ACTTTGTCGG ATAAACAGTT AGCACAGCTC AATCAGTTAT TTGATAAATA TCAATATGCT
GCCCGTAATG TGGATGCAAA ATCCCTGAAC AGTTTACTGA AACGGGTCGA TATTATTCCC
GAATCTATGG TGCTTATTCA GGCGGCCAAT GAATCGGGGT GGGGCAGTTC GCGTTTTGCC
CGTGAAGGCT TTAACTTTTT CGGCGAATGG TGTTTTAGCA ATGGTTGCGG CATAGTGCCA
TCCTCGCGAG GGGCAGGCAA AACCCATGAA GTGAAAGTGT TTCCCTCGGT GGACGCTTCA
GTGTCTTCGT ATATGCGTAA TTTGAATTCG AATACGGCAT ACACGCTGTT TCGCTCGATA
CGTGCCGATT TACGCTCTCA GGAAGTGGAG TTAAGTGCAG ATCAACTGAT CTATGGGTTA
GTGAATTATT CTGAAAGGCA AGAAGCTTAT ATCGACGAAT TACTCGATAT GTTACGTCAT
AATGAAAAAT ATTTGGTGAA GGCGGATGTA TAA
 
Protein sequence
MKTGRIGSFT LALALVILAI FSLRVWLIPT IDEPESIVKQ LENSVDPVTQ VPDFSAINDV 
AEKKRAFFDF LRPIIQQQNA IIATERDFIT DMLALVENDS TLSDKQLAQL NQLFDKYQYA
ARNVDAKSLN SLLKRVDIIP ESMVLIQAAN ESGWGSSRFA REGFNFFGEW CFSNGCGIVP
SSRGAGKTHE VKVFPSVDAS VSSYMRNLNS NTAYTLFRSI RADLRSQEVE LSADQLIYGL
VNYSERQEAY IDELLDMLRH NEKYLVKADV