Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1950 |
Symbol | |
ID | 4258375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2302464 |
End bp | 2303537 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638122613 |
Product | quinolinate synthetase |
Protein accession | YP_737996 |
Protein GI | 114047446 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0379] Quinolinate synthase |
TIGRFAM ID | [TIGR00550] quinolinate synthetase complex, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.692849 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00216399 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCCCA GCCCATTTGC CCCAACAATC GAAACTATTG ATTATCCGTT TCCGCCTAAA CCAATTCCTC TGTCCGATGC CGAAAAGGCG GACTACAAGG CAAGTATCAA GCAGCTGCTG ATTGAAAAAG ATGCGGTATT GGTTGCCCAT TATTATACCG ACCCTGAAAT TCAAGCGCTG GCTGAAGAAA CTGGCGGTTG TGTTTCCGAC TCACTCGAAA TGGCGCGTTT TGGCCGCGAT CATCCAGCCA AGACGTTAAT CGTCGCCGGG GTGAAGTTTA TGGGTGAAAC CGCCAAAATC TTAAGCCCAG AAAAAACCAT TCTGATGCCG ACCTTGGAGG CGACCTGTTC ATTGGACTTA GGTTGCCCCA TCGATAAATT CAGCGCCTTC TGTGATGCGC ATCCTGATCA TACCGTGGTC GTTTATGCCA ACACTTCGGC GGCGGTAAAA GCCCGTGCCG ATTGGGTAGT CACCTCAAGT ATTGCCCTTG AAATCGTTGA GCACTTAGAC AGCGAAGGCA AAAAAATCAT TTGGGGCCCA GACCGCCATT TAGGCAGTTA TATTGCCAAA CAAACGGGCG CCGAGATGTT GATGTGGCAG GGCGACTGTA TTGTTCACGA TGAGTTTAAG GCCAATGCGC TGCGTGATTT AAAGCGTGTT TACCCCGATG CGGCGATTCT AGTGCACCCA GAGTCACCCG CGAGTGTGGT AGCGATGGCG GATGCTGTCG GCTCCACCAG CCAGTTGATT AAAGCTGCGC AAACCATGGC TAATGAGCGT TTTATTGTGG CGACCGATCG CGGTATTTTC TACAAAATGC AACAAGCGGC GCCGGGTAAG ACACTGATTG AAGCACCTAC TGGCGGTAAT GGTGCCACCT GTAAGAGCTG TGCTCACTGT CCTTGGATGG CGATGAACGG CTTAAAGGCG ATTGAAGCGT CCTTAAGTGA CAGCGACAAA ACGACTCACG AAATCTTTGT CGATGAAGAC TTGCGAGTAA AAGCGTTAAT CCCACTGACC CGTATGCTCG ATTTCGCTAA AACACTGAAT ATGAAAGTGA AAGGCAACGC TTAA
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Protein sequence | MSPSPFAPTI ETIDYPFPPK PIPLSDAEKA DYKASIKQLL IEKDAVLVAH YYTDPEIQAL AEETGGCVSD SLEMARFGRD HPAKTLIVAG VKFMGETAKI LSPEKTILMP TLEATCSLDL GCPIDKFSAF CDAHPDHTVV VYANTSAAVK ARADWVVTSS IALEIVEHLD SEGKKIIWGP DRHLGSYIAK QTGAEMLMWQ GDCIVHDEFK ANALRDLKRV YPDAAILVHP ESPASVVAMA DAVGSTSQLI KAAQTMANER FIVATDRGIF YKMQQAAPGK TLIEAPTGGN GATCKSCAHC PWMAMNGLKA IEASLSDSDK TTHEIFVDED LRVKALIPLT RMLDFAKTLN MKVKGNA
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