| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1948 |
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| Symbol | |
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| ID | 4258373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2299737 |
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| End bp | 2300714 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638122611 |
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| Product | transketolase, central region |
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| Protein accession | YP_737994 |
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| Protein GI | 114047444 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.858675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000302013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGGCAGAAA TGAATATGTT ACAGGCCGTC AATGAGGCCT TGTCTATCGC CATGCAATCT
GACGAGCGCA TGGTGGTATT TGGTGAAGAC GTTGGCCACT TTGGCGGTGT GTTTCGCGCA
ACCTCAGGTT TACAGGAAAA GTTTGGTCGT AGCCGCTGCT TTAACACGCC GCTGACTGAA
CAAGGCATCG CGGGTTTTGC CAACGGTTTA GCCTCTAATG GCATGACCGC CGTAGCGGAA
ATCCAGTTCG CCGATTACAT CTTTCCAGCG TTCGATCAAA TAGTGAACGA GTCTGCTAAA
TTCCGTTACC GCAGTGGCAA TGAATTTAAT GTGGGAAGTC TAGTGTTCCG TACACCTTAT
GGTGGCGGTA TTGCGGGCGG CCATTATCAT TCACAATCGC CAGAAGCTTA TTTTACCCAA
ACCCCAGGCT TAAAAGTGGT TGTGCCACGT AATCCTGAGC AGGCTAAGGG CTTATTATTA
GCCTCTATTC GCGATAAAAA CCCTGTGGTG TTCTTTGAGC CAAAGCGTTT ATATCGCGCA
TCGGTTGGTG AAGTCCCTGC GGGCGATTAT GAAATCGAGT TGGGTAAAGC CGAAGTGGTG
CGTGAAGGGA AAGATATCAC CTTAGTGGCC TGGGGCGCAC AGATGGAAAT CATCGAAAAA
GCGGCCGACA TGGCGGCAAA AGAGGGGATT TCCTGCGAAA TTATCGACCT ACGTACACTC
GCACCTTGGG ATGTGGATAC AGTTGCTGAT TCTGTGAAGA AGACCGGCCG CTTACTGATC
AACCATGAAG CACCATTAAC GGGTGGTTTT GCCGGTGAAA TCGCGGCGAC GATTCAGCAG
GAATGTTTCC TGTATTTAGA ATCACCCATC AGCCGTGTAT GTGGTCTAGA TACCCCATAT
CCACTGGTCC ACGAAAAAGA ATATATGCCC GATGCGCTCA AAACCTTTGA AGCCATTAAG
GCATCGGTGA ACTTCTAG
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| Protein sequence | MAEMNMLQAV NEALSIAMQS DERMVVFGED VGHFGGVFRA TSGLQEKFGR SRCFNTPLTE
QGIAGFANGL ASNGMTAVAE IQFADYIFPA FDQIVNESAK FRYRSGNEFN VGSLVFRTPY
GGGIAGGHYH SQSPEAYFTQ TPGLKVVVPR NPEQAKGLLL ASIRDKNPVV FFEPKRLYRA
SVGEVPAGDY EIELGKAEVV REGKDITLVA WGAQMEIIEK AADMAAKEGI SCEIIDLRTL
APWDVDTVAD SVKKTGRLLI NHEAPLTGGF AGEIAATIQQ ECFLYLESPI SRVCGLDTPY
PLVHEKEYMP DALKTFEAIK ASVNF
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