| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1944 |
|---|
| Symbol | |
|---|
| ID | 4258369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 2294830 |
|---|
| End bp | 2296482 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638122607 |
|---|
| Product | phosphoglucomutase |
|---|
| Protein accession | YP_737990 |
|---|
| Protein GI | 114047440 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0033] Phosphoglucomutase |
|---|
| TIGRFAM ID | [TIGR01132] phosphoglucomutase, alpha-D-glucose phosphate-specific |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0370627 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00212574 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGCAATAC ATCAACGGGC AGGACAAACC GCGAGTCAGA CGGATCTGGT GAATATTCCA
AAGCTGATGA GCCATTATTA CAGCATCAAA CCTAATGTTG ATGCTGCCGA GCAACGTGTG
ACGTTCGGGA CCTCGGGTCA CCGCGGAACC GCGTTTCAAG CAAGTTTTAA CCAAGACCAT
ATTTGGGCGA TTACCCAGGC CGTGGTGGAT TATCGCCAAT CGGTGAATAT CGACGGCCCG
CTATTTTTAG GTATCGATAC CCACGCCTTA TCTTATGCGG CTTACGTGTC GGCGATTGAA
GTGTTAGCGG CCAATAAGGT GACTGTACAT ATTCAGCAAA ATGATGGCTT TACTCCCACG
CCAGTGGTGT CCCATGCCAT TATTTGTGCC AATCGTGAAG CGGCGCTGAG TGGCGCCGCG
TTAAGCGATG GTTTGATTAT TACGCCATCT CACAATCCAC CTCAGGATGG TGGTATCAAG
TACAATCCTC CCCATGGCGG CCCAGCCGAA GGCAATATCA CCGCTTGGAT TGAGTCCCGT
GCTAATGATT ACCTGCGCGC AGGGCTTAAG GGCGTTAATA AGCTGGCTTA TGCCGATGCG
TTAACCTCGG GTTATGTGCA TGCCATCGAT TTGATCACGC CCTATGTCGC GGATTTAGTC
AATGTGGTCG ATATGCACGC TATCGCTAAG GCTAAGCTGA AATTGGGCGT TGACCCATTA
GGCGGCTCGG GTATCCATTA TTGGGCGCCG ATTGCCAAGC ACTATGGCAT CGATATCACC
TTAGTTAACG ATAAGGTCGA CCCAAGCTTT AGCTTTATGT CGCTCGATAA AGACGGCAAG
ATCCGTATGG ATTGTTCTTC GCCCTATGCG ATGGCCGGCT TACTAGCCCA CAAAGAATCC
TTCGATTTAT GTGTCGGTAA CGATCCTGAC TACGACAGAC ACGGAATCGT GTGTCCGGGC
ACCGGGCTGA TGGACCCCAA CCACTATTTA GCGGTAGCGA TTGATTATCT GCTGACCCAC
AGACCCGAAT GGAGCGAGCA GTTAGCCATT GGCAAGACGC TAGTATCGAG CGCGCTTATC
GATAAAATCT GCGCCTTCCA TGGCAAAAAA TTACTCGAAG TTCCCGTTGG CTTTAAGTGG
TTCGTCGATG GGTTAGCTGA GGCGACTATT GCCTTTGGCG GTGAGGAGAG TGCGGGCGCG
GCGTTCCTGC GCCGTGATGG CTCGACTTGG TGTACCGACA AAGACGGTTT TATTCTGGTA
CTGCTTGCGG CCGAAATGCT TGCGGTTACT GGCAAGACAC CGGGGCAACG CCATCAAGAA
TTAGTGGCGC AATTCGGTCA AAGCTTCTAC AAGCGTATCG ACAGCCCCAT TAGCCTTGAG
AACAAAGCCA AATTTGCCAA GCTTAATGCC GAAACCTTAA ACGCCACTAT GCTGGCGGGT
GAGAAGATTG ATGCCGTATT GACCCACGCC CCAGGTAACA ACGCCTCTAT AGGTGGCATT
AAAGTGACGA CGGCCAATGG TTGGTTCGCG GCGCGGCCGT CGGGTACTGA GGCGTTATTT
AAGATTTACG GCGAGAGCTT TATCAGTGAG CAGCATCTTG CTGATATCAT TAAGGATGCA
CAGGCCTTGA TTGATAAGGC GCTTAGCGCC TGA
|
|---|
| Protein sequence | MAIHQRAGQT ASQTDLVNIP KLMSHYYSIK PNVDAAEQRV TFGTSGHRGT AFQASFNQDH
IWAITQAVVD YRQSVNIDGP LFLGIDTHAL SYAAYVSAIE VLAANKVTVH IQQNDGFTPT
PVVSHAIICA NREAALSGAA LSDGLIITPS HNPPQDGGIK YNPPHGGPAE GNITAWIESR
ANDYLRAGLK GVNKLAYADA LTSGYVHAID LITPYVADLV NVVDMHAIAK AKLKLGVDPL
GGSGIHYWAP IAKHYGIDIT LVNDKVDPSF SFMSLDKDGK IRMDCSSPYA MAGLLAHKES
FDLCVGNDPD YDRHGIVCPG TGLMDPNHYL AVAIDYLLTH RPEWSEQLAI GKTLVSSALI
DKICAFHGKK LLEVPVGFKW FVDGLAEATI AFGGEESAGA AFLRRDGSTW CTDKDGFILV
LLAAEMLAVT GKTPGQRHQE LVAQFGQSFY KRIDSPISLE NKAKFAKLNA ETLNATMLAG
EKIDAVLTHA PGNNASIGGI KVTTANGWFA ARPSGTEALF KIYGESFISE QHLADIIKDA
QALIDKALSA
|
|---|
| |