Gene Shewmr7_1938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1938 
Symbol 
ID4258466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2290685 
End bp2291866 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content48% 
IMG OID638122601 
Producthypothetical protein 
Protein accessionYP_737984 
Protein GI114047434 
COG category[S] Function unknown 
COG ID[COG4394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000960978 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.001985 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAACCA CCGCCCCCCA CTGGGACATC TTTTGCTGCG TCGTCGATAA TTACGGCGAT 
ATCGGCGTCA CTTGGCGCTT AGCCAAACAG CTGGTCAATG AATATCAGCT CCCCATTACA
CTCTGGGTCG ATGACTTAAA CAGCTTCTCG CATATTTTAC CGAGCCTTGA CCCAAACCAA
AGCAGCCAAG TCTTTAATGG CGTCACCATC AATCATTGGA CAACGCCCCT GCCCGTGGCA
TTTGTGCCCG GCGCCGTGTT AATTGAAGCC TTTGCCTGCG AGCTGCCTGA CGAGGTCAAA
CAACGACTCA TCGCGCTGCA CAACACAACA CCGCAAGCGG TGCCCGTATG GCTGAATTTG
GAATATTTAA GCGCCGAAGA CTGGGTCGAT GGCTGCCATG GGTTACCCTC GATGCAGGCA
AGCGGCATCA AAAAGTATTT CTTTTTCCCG GGTTTTACTC CAAAGACGGG TGGACTGATC
TGTGAGCGGG AGCTGTTTGC CGAACGCGAT GCATGGCAAC AGGATAGCGC CAATAAACTG
CAATTATTTG AGCGTCTTGG TCTTAAGGAT ATTCAAGCGC AAGATACTGT CTACAGCGTC
TTTAGTTATG AAACTGATTC TCTGCCGGCG TTATGTGAGC TCTGGCAAGC CAGTGCAACA
AGCGATGCCA AAATCCATGC GCTGATTCCC AAGGGACGTA GCTTAAATAG CTTACAACAC
ATATTACCCT GCAAGGTTGA AGCGCTCAGC CCCGGACAGC AAATCAAGCT AGGTGATTTG
ACGCTGCATA TCTTGCCGAT GACGGACCAA CAGGGGTTTG ACCGTCTGTT GTGGAGCTGC
GACTTTAACA TTGTCCGCGG TGAAGACAGT TTCTTGAGGG CGCAATGGGC CGCTAAACCC
TTTATTTGGC ATATTTATCC GCAAGAAGAT GATTACCATC TAATAAAATT AGAAGCTTTT
ATCCAACTTT ACTGCGATAA TCTGCCCCCT AATATTGCTG GTACTTGGTC TAAATTGAAT
CTTGCGTTTA ACCAAGGCGA GCAATCTGCC GTGAAGACTC ACTGGCAAAA CCTAAATCCT
GTCAGTTTGC CACTCTTACA ACATGCTAAA GAATGGCCAA TTGACGCAAT AAATGCTGCA
GATCTTGCAA CTCGGCTAGT CCAATTCGTG AAAAAAAGCT AA
 
Protein sequence
MATTAPHWDI FCCVVDNYGD IGVTWRLAKQ LVNEYQLPIT LWVDDLNSFS HILPSLDPNQ 
SSQVFNGVTI NHWTTPLPVA FVPGAVLIEA FACELPDEVK QRLIALHNTT PQAVPVWLNL
EYLSAEDWVD GCHGLPSMQA SGIKKYFFFP GFTPKTGGLI CERELFAERD AWQQDSANKL
QLFERLGLKD IQAQDTVYSV FSYETDSLPA LCELWQASAT SDAKIHALIP KGRSLNSLQH
ILPCKVEALS PGQQIKLGDL TLHILPMTDQ QGFDRLLWSC DFNIVRGEDS FLRAQWAAKP
FIWHIYPQED DYHLIKLEAF IQLYCDNLPP NIAGTWSKLN LAFNQGEQSA VKTHWQNLNP
VSLPLLQHAK EWPIDAINAA DLATRLVQFV KKS