Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1938 |
Symbol | |
ID | 4258466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2290685 |
End bp | 2291866 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638122601 |
Product | hypothetical protein |
Protein accession | YP_737984 |
Protein GI | 114047434 |
COG category | [S] Function unknown |
COG ID | [COG4394] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000960978 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.001985 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAACCA CCGCCCCCCA CTGGGACATC TTTTGCTGCG TCGTCGATAA TTACGGCGAT ATCGGCGTCA CTTGGCGCTT AGCCAAACAG CTGGTCAATG AATATCAGCT CCCCATTACA CTCTGGGTCG ATGACTTAAA CAGCTTCTCG CATATTTTAC CGAGCCTTGA CCCAAACCAA AGCAGCCAAG TCTTTAATGG CGTCACCATC AATCATTGGA CAACGCCCCT GCCCGTGGCA TTTGTGCCCG GCGCCGTGTT AATTGAAGCC TTTGCCTGCG AGCTGCCTGA CGAGGTCAAA CAACGACTCA TCGCGCTGCA CAACACAACA CCGCAAGCGG TGCCCGTATG GCTGAATTTG GAATATTTAA GCGCCGAAGA CTGGGTCGAT GGCTGCCATG GGTTACCCTC GATGCAGGCA AGCGGCATCA AAAAGTATTT CTTTTTCCCG GGTTTTACTC CAAAGACGGG TGGACTGATC TGTGAGCGGG AGCTGTTTGC CGAACGCGAT GCATGGCAAC AGGATAGCGC CAATAAACTG CAATTATTTG AGCGTCTTGG TCTTAAGGAT ATTCAAGCGC AAGATACTGT CTACAGCGTC TTTAGTTATG AAACTGATTC TCTGCCGGCG TTATGTGAGC TCTGGCAAGC CAGTGCAACA AGCGATGCCA AAATCCATGC GCTGATTCCC AAGGGACGTA GCTTAAATAG CTTACAACAC ATATTACCCT GCAAGGTTGA AGCGCTCAGC CCCGGACAGC AAATCAAGCT AGGTGATTTG ACGCTGCATA TCTTGCCGAT GACGGACCAA CAGGGGTTTG ACCGTCTGTT GTGGAGCTGC GACTTTAACA TTGTCCGCGG TGAAGACAGT TTCTTGAGGG CGCAATGGGC CGCTAAACCC TTTATTTGGC ATATTTATCC GCAAGAAGAT GATTACCATC TAATAAAATT AGAAGCTTTT ATCCAACTTT ACTGCGATAA TCTGCCCCCT AATATTGCTG GTACTTGGTC TAAATTGAAT CTTGCGTTTA ACCAAGGCGA GCAATCTGCC GTGAAGACTC ACTGGCAAAA CCTAAATCCT GTCAGTTTGC CACTCTTACA ACATGCTAAA GAATGGCCAA TTGACGCAAT AAATGCTGCA GATCTTGCAA CTCGGCTAGT CCAATTCGTG AAAAAAAGCT AA
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Protein sequence | MATTAPHWDI FCCVVDNYGD IGVTWRLAKQ LVNEYQLPIT LWVDDLNSFS HILPSLDPNQ SSQVFNGVTI NHWTTPLPVA FVPGAVLIEA FACELPDEVK QRLIALHNTT PQAVPVWLNL EYLSAEDWVD GCHGLPSMQA SGIKKYFFFP GFTPKTGGLI CERELFAERD AWQQDSANKL QLFERLGLKD IQAQDTVYSV FSYETDSLPA LCELWQASAT SDAKIHALIP KGRSLNSLQH ILPCKVEALS PGQQIKLGDL TLHILPMTDQ QGFDRLLWSC DFNIVRGEDS FLRAQWAAKP FIWHIYPQED DYHLIKLEAF IQLYCDNLPP NIAGTWSKLN LAFNQGEQSA VKTHWQNLNP VSLPLLQHAK EWPIDAINAA DLATRLVQFV KKS
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