Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1936 |
Symbol | |
ID | 4258464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2288420 |
End bp | 2289802 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638122599 |
Product | Na+/H+ antiporter NhaC |
Protein accession | YP_737982 |
Protein GI | 114047432 |
COG category | [C] Energy production and conversion |
COG ID | [COG1757] Na+/H+ antiporter |
TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000100121 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00835869 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTGAAC CGACAGCGTT AAGTCTTATT CCACCTCTGG TGGTATTGGT GTTGGCCATT TGGTTACGCC GCCCCATTCT TTCTCTGATC ATTGGTGCGG TAACTGGTTT TCTGTTACTC GATCCGTCGC AAGTCTTAAA TAATTTCGCC AGTACTTCAT TAAAAGTCAT GGCCGATGAA ACCATCGGTT GGTTGATTTT AGTGTGTGGT TGTTTTGGTG CGTTAATTGC CCTGTTAGTG CGTACTGGTG GTGCACTGGC GTTTGGTCGA AATGCACTGA AATTTGCTAA AGGCCCTAAA TCCTCCCTGT TTATGACCTT TATTCTCGGG ATTGTGATTT TTATCGATGA CTATCTGAAC GCGTTAACCG TGGGTGAAAC CATGAAGCGT GTGACCGATA AGTTTAAAGT GTCCCGTGAA ATGCTGGCCT ATGTGGTTGA CTCTACCGCA GCGCCAGTTT GCGTGCTCGT GCCATTATCC ACCTGGGCAG TATTCTTTGG TGGCTTGCTG GTCGATAACG GTGTGGCGGC AGAAGGTCAG GGCATTAGCG TATATATGCA GGCGATCCCC TACATGCTTT ACGCTTGGTT AGCCGTAGCC ATGGTGTTAC TGGTGGTGTT AGGTGTTGTG CCTGCCATTG GTCCGATGAA AAAAGCCCAG CTGCGCGCCG CCCAGGGTGA ACCTGCTGAG GCGCAAGTCG ATTTAGACCA GGTACAAACC TCTGATGAAT ACGCGATTGC TGCGATTGAA GAAGAGTTTA AGCATGCCGA CAATCAGGGC AAGCTGCATA ACTTCCTAGT GCCTATTCTG CTACTGGTTG CCTTTACCGT TTATTTTGAT ATCGACGTGT GGAAGGGTTT GTTAGCGACA TTAGTTATCA CGCTGCCTTA CTATGCGGTG CAGCGCTTAA TGCCACTGTC AGAGATGATG GATCAGATGA TCGATGGTTT TAAGAGCATG TTGCCCGCCA TTGGTACCGT GATCGCCGCA TTCGTATTTA AAGATGTGTG TGATGCGCTG CTGCTGCCAC AATATGTGAT TGAGTCATTG AGCCCATTCA TGACGCCTAA GATGTTGCCA GCGGTGGTAT TCCTCTCTAT GGCGATCCTT GCCTTTGCGA CGGGTTCAAG CTGGGGTATT TTTGCGGTGA CCATTCCAAT TGTGATGCCA CTGGCGCAAT CGGTTGGTGC TGATATTCCA CTGGTGATTG GTGCGCTGTT ATCGGCATCA TCTTTTGGTA GCCAAGCGTG TTTCTACTCG GATTCAACTG TATTGGCCGC ACAAGGCTCT GGTTGTAACT TAGTGAGCCA TGCGGTGACT CAGTTACCCT ATGCGTTAAT TGCCGCTGTG ATTGCGTTCA TTGGCTTTAT CTTGATTGCC TAA
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Protein sequence | MSEPTALSLI PPLVVLVLAI WLRRPILSLI IGAVTGFLLL DPSQVLNNFA STSLKVMADE TIGWLILVCG CFGALIALLV RTGGALAFGR NALKFAKGPK SSLFMTFILG IVIFIDDYLN ALTVGETMKR VTDKFKVSRE MLAYVVDSTA APVCVLVPLS TWAVFFGGLL VDNGVAAEGQ GISVYMQAIP YMLYAWLAVA MVLLVVLGVV PAIGPMKKAQ LRAAQGEPAE AQVDLDQVQT SDEYAIAAIE EEFKHADNQG KLHNFLVPIL LLVAFTVYFD IDVWKGLLAT LVITLPYYAV QRLMPLSEMM DQMIDGFKSM LPAIGTVIAA FVFKDVCDAL LLPQYVIESL SPFMTPKMLP AVVFLSMAIL AFATGSSWGI FAVTIPIVMP LAQSVGADIP LVIGALLSAS SFGSQACFYS DSTVLAAQGS GCNLVSHAVT QLPYALIAAV IAFIGFILIA
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