Gene Shewmr7_1934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1934 
Symbol 
ID4258462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2285664 
End bp2286251 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content46% 
IMG OID638122597 
Producthypothetical protein 
Protein accessionYP_737980 
Protein GI114047430 
COG category[R] General function prediction only 
COG ID[COG1896] Predicted hydrolases of HD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00115512 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0675072 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCATT TATTTGCCCA CCTCGCCCGA ATGAAACTTA TCCAGCGCTG GCCCTTAATG 
TACAACGTGC GCACCGAAAA CGTTCAAGAG CATTCACTGC AAGTTGCCAT GGTCGCCCAT
GCCCTCGTGA TTATCAGTAA TAAGAAATTT GGCACCACGC TCGATGCCCA TCAGGCAACC
AGTTTAGCGA TTTTCCATGA TGCCAGTGAG ATTTTAACTG GCGACTTACC GACTCCGGTA
AAGTACTTTA ATAAAGAAAT CGAAGCCGAG TATAAGAAGA TTGAGGCCAT TGCCGAGCAA
CGCATGCTCG ATATGGTACC CGATGAATTT AAAGAGGATT ATCGCAGCCT GTTTATTAGC
GATTACGCCG ATCCGATTTA CAAAGCCATA GTCAAATCCG CCGATACCCT GTGCGCTTAC
CTTAAATGTC TAGAGGAAAA CCGCGCTGGC AACACCGAAT TTAATACCGC GCGTAAACGA
CTCGAAGCCA TGCTGGCGGC CAATTCCGAT CCGGCGGTGA AATATTTTAT GGATTGCTTT
GTGCCAAGTT TCACCTTGAA TTTAGACGAA ATTAACAAGA TGTTGTGA
 
Protein sequence
MSHLFAHLAR MKLIQRWPLM YNVRTENVQE HSLQVAMVAH ALVIISNKKF GTTLDAHQAT 
SLAIFHDASE ILTGDLPTPV KYFNKEIEAE YKKIEAIAEQ RMLDMVPDEF KEDYRSLFIS
DYADPIYKAI VKSADTLCAY LKCLEENRAG NTEFNTARKR LEAMLAANSD PAVKYFMDCF
VPSFTLNLDE INKML