| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1931 |
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| Symbol | |
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| ID | 4258459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2281739 |
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| End bp | 2283565 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638122594 |
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| Product | phosphogluconate dehydratase |
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| Protein accession | YP_737977 |
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| Protein GI | 114047427 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0231353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.168183 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTCAG TCGTTCAATC TGTTACCGAC AGAATTATTG CCCGTAGCAA AGCATCTCGT
GAAGCGTATT TAGCCGCGTT AAATGATGCT CGTAACCATG GCGTACACCG TAGCTCGTTA
AGCTGCGGTA ACTTAGCCCA CGGTTTTGCT GCTTGTAATC CAGATGACAA AAATTCATTG
CGTCAACTGA CCAAAGCCAA CATCGGGATT ATTACCGCAT TCAACGACAT GTTGTCTGCA
CACCAACCCT ATGAAACCTA CCCTGAACTG CTGAAAAAAG CTTGTCAGGA AGTGGGCAGC
GTTGCACAGG TCGCCGGTGG TGTACCTGCG ATGTGTGACG GTGTGACTCA GGGTCAACCC
GGGATGGAAC TGAGCTTACT GAGTCGTGAA GTGATTGCCA TGGCGACGGC GGTAGGCTTA
TCCCACAACA TGTTTGATGG CGCCTTATTA CTGGGTATTT GCGACAAAAT TGTGCCGGGT
TTATTGATCG GCGCCTTAAG TTTTGGCCAT TTACCTATGT TGTTTGTGCC TGCAGGCCCA
ATGAAGTCGG GAATTCCTAA CAAGGAAAAG GCCCGTATTC GCCAGCAATT TGCCCAAGGT
AAAGTCGATA GAGCGCAGCT GCTTGAAGCC GAAGCGCAGT CTTATCACAG CGCTGGCACT
TGTACCTTCT ACGGTACGGC TAACTCGAAC CAGCTGATGC TCGAAGTCAT GGGGCTGCAA
TTGCCGGGTT CATCCTTTGT GAATCCTGAC GACCCACTGC GTGAAGCGCT GAATAAAATG
GCGGCCAAGC AAGTGTGCCG CTTAACCGAA CTGGGTACTC AATACAGCCC AATCGGTGAA
GTGGTTAACG AGAAATCCGT GGTGAACGGC ATAGTGGCGC TACTGGCAAC GGGTGGTTCA
ACTAACTTGA CCATGCACAT TGTGGCGGCG GCGCGTGCGG CTGGCATTAT CGTGAACTGG
GATGATTTTT CTGAACTATC TGACGCGGTT CCTTTGCTGG CCCGTGTTTA TCCAAACGGT
CATGCGGATA TTAACCACTT CCACGCCGCA GGCGGTATGG CTTTCCTTAT CAAGGAATTA
CTCGATGCGG GCCTACTGCA CGAGGATGTC AACACTGTTG CCGGTTTTGG TCTACGTCGT
TACACCCAAG AGCCAAAATT ACTCGATGGC GAGCTGCGCT GGGTCGATGG TCCAACCGTC
AGCCTAGATA CCGAAGTATT AACGTCTGTC GCTACGCCTT TCCAAAACAA CGGTGGCTTA
AAACTGCTTA AGGGCAACTT GGGCCGTGCT GTGATTAAAG TGTCAGCCGT GCAAGAAAAG
CACCGTGTAG TTGAAGCCCC TGCCGTGGTG ATTGACGATC AAAACAAACT CGATGCGCTG
TTTAAATCCG GCGCATTAGA CCGAGATTGT GTGGTGGTAG TTAAAGGCCA AGGGCCGAAA
GCGAACGGTA TGCCAGAGCT GCACAAGTTA ACGCCACTGT TAGGCTCTCT GCAGGACAAA
GGCTTTAAAG TGGCACTGAT GACCGACGGT CGTATGTCGG GCGCATCGGG CAAAGTACCA
GCAGCGATTC ACTTAACGCC AGAGGCTATC GATGGCGGGC TCATTGCCAA AGTGCAAGAT
GGCGATCTTA TTCGTGTCGA CGCGCTGACC GGTGAGCTGA GTCTATTGGT CTCTGATGCC
GAACTTGCCG CGAGAACCGC CGCTGAAATC GATTTACGCC ACTCACGCTA TGGAATGGGC
CGTGAGTTGT TTGGGGCACT GCGTTCAAAC TTAAGCAGTC CAGAAACCGG TGCGCGCAGT
ACCAGCGCCA TTGACGAACT TTATTAA
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| Protein sequence | MHSVVQSVTD RIIARSKASR EAYLAALNDA RNHGVHRSSL SCGNLAHGFA ACNPDDKNSL
RQLTKANIGI ITAFNDMLSA HQPYETYPEL LKKACQEVGS VAQVAGGVPA MCDGVTQGQP
GMELSLLSRE VIAMATAVGL SHNMFDGALL LGICDKIVPG LLIGALSFGH LPMLFVPAGP
MKSGIPNKEK ARIRQQFAQG KVDRAQLLEA EAQSYHSAGT CTFYGTANSN QLMLEVMGLQ
LPGSSFVNPD DPLREALNKM AAKQVCRLTE LGTQYSPIGE VVNEKSVVNG IVALLATGGS
TNLTMHIVAA ARAAGIIVNW DDFSELSDAV PLLARVYPNG HADINHFHAA GGMAFLIKEL
LDAGLLHEDV NTVAGFGLRR YTQEPKLLDG ELRWVDGPTV SLDTEVLTSV ATPFQNNGGL
KLLKGNLGRA VIKVSAVQEK HRVVEAPAVV IDDQNKLDAL FKSGALDRDC VVVVKGQGPK
ANGMPELHKL TPLLGSLQDK GFKVALMTDG RMSGASGKVP AAIHLTPEAI DGGLIAKVQD
GDLIRVDALT GELSLLVSDA ELAARTAAEI DLRHSRYGMG RELFGALRSN LSSPETGARS
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