Gene Shewmr7_1921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1921 
Symbol 
ID4258660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2269607 
End bp2270101 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content48% 
IMG OID638122584 
ProductSecC motif-containing protein 
Protein accessionYP_737967 
Protein GI114047417 
COG category[S] Function unknown 
COG ID[COG3012] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0182958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACACG ACAAAACCTG CCCTTGCGGC AGCCAAAAAA TCTATCAAGA TTGCTGTCAA 
ATACTGCATC TAGGGCTCGA TTCAGGAGCA CAACTGGCGA CGTGCCCTGA GCAATTAATG
CGCTCTCGCT ATTGCGCCTT TGTGTTGAAA AATTTTGATT ACATTATCAA AACACACCAT
GCTGATTTCC TCGAAGGCTT AACCCTTGAG CAGCTCCAAC AAGGCCCACA TCCCGAATGG
TTAGGGCTCG ATGTGTTATC CGCCGATGAC ACTACCCAGT CCGATGGCAG CAAGGGCGGT
ACTGTAACCT TCAAAGCCTG GTATAAGATG AATGGCGAAA TTGATGCCAT TTACGAGCGC
TCTGAGTTTA TCTTCGAGCA AAGTCGTTGG TTTTACACTC AAGGCCATCA AATGCATGCC
AAATTACCGG GGCGCAATGA TCCCTGCGTC TGTCACAGCG GTAAGAAGTT TAAGCAGTGC
TGCATGAAGG GTTAA
 
Protein sequence
MIHDKTCPCG SQKIYQDCCQ ILHLGLDSGA QLATCPEQLM RSRYCAFVLK NFDYIIKTHH 
ADFLEGLTLE QLQQGPHPEW LGLDVLSADD TTQSDGSKGG TVTFKAWYKM NGEIDAIYER
SEFIFEQSRW FYTQGHQMHA KLPGRNDPCV CHSGKKFKQC CMKG