Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1921 |
Symbol | |
ID | 4258660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2269607 |
End bp | 2270101 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638122584 |
Product | SecC motif-containing protein |
Protein accession | YP_737967 |
Protein GI | 114047417 |
COG category | [S] Function unknown |
COG ID | [COG3012] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0182958 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACACG ACAAAACCTG CCCTTGCGGC AGCCAAAAAA TCTATCAAGA TTGCTGTCAA ATACTGCATC TAGGGCTCGA TTCAGGAGCA CAACTGGCGA CGTGCCCTGA GCAATTAATG CGCTCTCGCT ATTGCGCCTT TGTGTTGAAA AATTTTGATT ACATTATCAA AACACACCAT GCTGATTTCC TCGAAGGCTT AACCCTTGAG CAGCTCCAAC AAGGCCCACA TCCCGAATGG TTAGGGCTCG ATGTGTTATC CGCCGATGAC ACTACCCAGT CCGATGGCAG CAAGGGCGGT ACTGTAACCT TCAAAGCCTG GTATAAGATG AATGGCGAAA TTGATGCCAT TTACGAGCGC TCTGAGTTTA TCTTCGAGCA AAGTCGTTGG TTTTACACTC AAGGCCATCA AATGCATGCC AAATTACCGG GGCGCAATGA TCCCTGCGTC TGTCACAGCG GTAAGAAGTT TAAGCAGTGC TGCATGAAGG GTTAA
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Protein sequence | MIHDKTCPCG SQKIYQDCCQ ILHLGLDSGA QLATCPEQLM RSRYCAFVLK NFDYIIKTHH ADFLEGLTLE QLQQGPHPEW LGLDVLSADD TTQSDGSKGG TVTFKAWYKM NGEIDAIYER SEFIFEQSRW FYTQGHQMHA KLPGRNDPCV CHSGKKFKQC CMKG
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