Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1918 |
Symbol | |
ID | 4258657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2266139 |
End bp | 2266627 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638122581 |
Product | hypothetical protein |
Protein accession | YP_737964 |
Protein GI | 114047414 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00132768 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAATCG ATGTTCCTTT AATCAACGAA GCCCAAATTG GCTCCCGCTT AAATGCGGCA ATCGAACACA ACAGGCGAGG AGAGTTCGCC CTGTTGCTGT CGCTATTGTC TGCAGACGCG AGGGACATGG CGCAGTTTCA ATGGCAAAAA GAGCTCGATA ATGCAGAAAA ATTACAACGT CAGTTCGAGT TACCCCCAAA GCAAGCACTT GTGGCGGATT TATCGACGGA TAACAAGGTT ACCGACAATA GTGCTGTTTT TGCTGAGCAA GGGGCGAGGG CGTTTCAACT GCAACAGGCA TTGCGCCCAG AAGCATTAGT GATCCGCGGT GCTGAATCTA TCGCCATGGC CGAAGCCTTA AGCAATTGCG ATCTCACCAC ACGTCTGCGC CAACGTGGCC AGTTGTCATC CCCGAAAATG GACGTTATGC ATTTTGCCGA TCAACTGGCG ATTCAACGGA ACTTAGTGCC GTTATTGGCC AGCGCCTAA
|
Protein sequence | MQIDVPLINE AQIGSRLNAA IEHNRRGEFA LLLSLLSADA RDMAQFQWQK ELDNAEKLQR QFELPPKQAL VADLSTDNKV TDNSAVFAEQ GARAFQLQQA LRPEALVIRG AESIAMAEAL SNCDLTTRLR QRGQLSSPKM DVMHFADQLA IQRNLVPLLA SA
|
| |