| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1915 |
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| Symbol | |
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| ID | 4258654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2263217 |
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| End bp | 2263834 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638122575 |
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| Product | rhomboid family protein |
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| Protein accession | YP_737961 |
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| Protein GI | 114047411 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.135917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGACTGG TAACGTTAAA AAAACTCGGC CCCTATTGGC TGGCGCTTAT CGTCAGTCTG
CTCTGCGCGC TCTTGTATGT TGCGGGACTT TTTACCCCGA GCATAGATAA CCTGCTCGCC
TATCGCCGCA GCGCCATCAG TGATGGCCAG TGGTGGCGCC TGATCACAGG CAATCTGCTG
CATACCAATC ATTGGCACCT GCTGATGAAC CTCGCAGGAT TATGGGTAGT GTTGTTTTTG
CACCACTTTC ATTATCGACT TAACGGATTA ACCGCGCTGT TTATCCTACT TTGTCTGTTT
GAAGGCATTG GCCTATATTT GGGTTATCCG GAGTTATTAG GTTATGTGGG GCTGAGCGGC
ATGTTACACG GCCTATTTAC CTTTGGTGCA GTGCAGGATA TACGCCGCAA AATGCGCTCG
GGTTATTTGT TGCTGATCGG GGTGATAGTC AAAGTCGGCC ATGAACAGTT CTATGGCGCC
AGTGATGATG TGACCGCAAT GATTGGTGCT CGCGTGGCCA CCGAGGCGCA TTTAGTCGGC
CTGATCTGCG GCTTAGTCTG CGCGCTTATG GTGTTTGTGT ACCAACGAAG CAGATTCGCC
AAGGAAACGC AGCGCTAA
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| Protein sequence | MRLVTLKKLG PYWLALIVSL LCALLYVAGL FTPSIDNLLA YRRSAISDGQ WWRLITGNLL
HTNHWHLLMN LAGLWVVLFL HHFHYRLNGL TALFILLCLF EGIGLYLGYP ELLGYVGLSG
MLHGLFTFGA VQDIRRKMRS GYLLLIGVIV KVGHEQFYGA SDDVTAMIGA RVATEAHLVG
LICGLVCALM VFVYQRSRFA KETQR
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