| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1914 |
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| Symbol | |
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| ID | 4258653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2261054 |
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| End bp | 2263075 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638122574 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_737960 |
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| Protein GI | 114047410 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00112158 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGAAT CTGTTTTTCA GCTTGAATCC CAATTTGCCC CCGCAGGGGA TCAGCCCACG
GCTATTGCTA AATTGGTCGA TGGTCTCGAA TCAGGCCTAG CTTGCCAAAC CCTATTGGGG
GTAACAGGCT CCGGCAAGAC ATTCACCATC GCCAATGTGA TCGCTCAGCT TGGGCGCCCA
ACCATTATTA TGGCGCCAAA CAAGACACTG GCTGCGCAGC TCTATGGTGA GATGAAAGAG
TTTTTCCCCA ATAATGCGGT GGAATATTTT GTTTCCTATT ACGACTATTA CCAACCAGAA
GCCTACGTGC CTGCATCGAA TACCTTTATT GAGAAGGATG CCTCGGTTAA CGCCCATATC
GAGCAGATGC GACTTTCGGC GACGAAAGCC TTGTTGGAGC GCAAGGATGT CGTCTTGATT
GCCTCTGTAT CGGCGATTTA TGGCCTTGGC GATCCCGATT CATATTTAAA GATGTTATTG
CACCTACGCC AGGGCGATAC CATGGGGCAG CGAGATATTC TTAAGCGCTT AAGTGAACTG
CAATACACCC GCAATGATAT TGAATTGCAG CGTGGTACCT TCCGCGTTCG TGGTGAAGTT
ATCGATATTT TCCCTGCGGA TTCTGACCGC TACGGGATTC GGGTCGAACT CTTTGATGAT
GAAATTGAGC GCCTAAGCGA ATTTGATCCG TTAACGGGAC AGATTGTTAA ACGTATTGCT
CGCACCACTG TGTATCCCAA AACCCACTAT GTGACGCCGC GTGAAAAAAT CCTTGAAGCG
ACTGAGTCTA TTAAGCAAGA GCTGCGCGAG CGTAAGCAGT ATCTGCTCGA CAACAATAAG
CTCATCGAAG CGCAGCGGAT CCATGAGCGG GTGCAATACG ATATCGAGAT GATGGTTGAG
TTGGGTTATT GCTCCGGCAT TGAGAACTAC TCCCGCTATT TGTCGGGACG GGCGCCGGGA
GAAGGGCCAC CAACCTTGCT GGATTATTTA CCCGCCGATG GTTTGTTGAT CATCGACGAG
TCCCACGTCA CTGTGCCGCA AATTGGTGCT ATGTATAAGG GCGATCGTTC CCGTAAAACC
ACTTTGGTTG AATACGGCTT CCGTTTACCC TCGGCGCTAG ATAACCGGCC GTTGAAGTTC
GAAGAGTTTG AGCAATTGAT GCCGCAGACC ATTTATGTGT CGGCAACGCC TAATCCTTAC
GAACTGGAGA AAAGCGACGG CGAGATTGTT GAACAAGTCG TGCGGCCAAC GGGGTTACTC
GATCCCGAGT TGGAAGTTCG CCCGGTCAAC ATTCAGGTGG ACGATTTACT CTCCGAGGTC
GCCAAACGTG TCGCCGTCAA CGAGCGGGTG CTTGTCACCA CTCTAACCAA GCGCATGTCG
GAGGATTTAA CCGAATACCT CGATGAGCAT GGCGTCAAAG TCCGTTATTT GCATTCGGAT
ATCGATACCG TGGAGCGGGT GGAGATCATT CGCGATCTTC GCCTCGGTAA GTTTGATGTG
TTGGTCGGTA TCAACTTGCT GCGTGAAGGT TTAGACATGC CCGAAGTTTC CTTAGTCTGT
ATTCTCGATG CGGATAAGGA AGGCTTTTTA CGTTCGGAGC GTTCGCTTAT TCAGACCATA
GGTCGCGCCG CGCGTAACGT CAATGGCAAG GTTATCCTCT ATGCGGATAG GATCACTCAG
TCGATGGCCA AGGCGATGGG AGAAACTGAG CGCCGCCGTG AGAAACAGCG CGCCTACAAT
CTTGAGCACG GCATTGTTCC TAAAGGGGTG GTGAAACGCA TTACCGACGT AATGGATGTC
GATGATGGTA GAGAGTCTGA AAAAGGTTAT CGTCAGTCAT CACTGGATAA AGTGGCTGAA
CCTAAAGCCA AACGTTATCA AGCCGATGCG GCGCAGCTGA GCCATGATAT CGACAAGCTC
GAGAAGCAAA TGCATGAACA TGCGCGTAAC TTGGAGTTTG AAGAGGCAGC GGCGCTACGC
GATGAGGTGA AACGGTTACG GGAGTTGCTG ATCACCGCCT AA
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| Protein sequence | MSESVFQLES QFAPAGDQPT AIAKLVDGLE SGLACQTLLG VTGSGKTFTI ANVIAQLGRP
TIIMAPNKTL AAQLYGEMKE FFPNNAVEYF VSYYDYYQPE AYVPASNTFI EKDASVNAHI
EQMRLSATKA LLERKDVVLI ASVSAIYGLG DPDSYLKMLL HLRQGDTMGQ RDILKRLSEL
QYTRNDIELQ RGTFRVRGEV IDIFPADSDR YGIRVELFDD EIERLSEFDP LTGQIVKRIA
RTTVYPKTHY VTPREKILEA TESIKQELRE RKQYLLDNNK LIEAQRIHER VQYDIEMMVE
LGYCSGIENY SRYLSGRAPG EGPPTLLDYL PADGLLIIDE SHVTVPQIGA MYKGDRSRKT
TLVEYGFRLP SALDNRPLKF EEFEQLMPQT IYVSATPNPY ELEKSDGEIV EQVVRPTGLL
DPELEVRPVN IQVDDLLSEV AKRVAVNERV LVTTLTKRMS EDLTEYLDEH GVKVRYLHSD
IDTVERVEII RDLRLGKFDV LVGINLLREG LDMPEVSLVC ILDADKEGFL RSERSLIQTI
GRAARNVNGK VILYADRITQ SMAKAMGETE RRREKQRAYN LEHGIVPKGV VKRITDVMDV
DDGRESEKGY RQSSLDKVAE PKAKRYQADA AQLSHDIDKL EKQMHEHARN LEFEEAAALR
DEVKRLRELL ITA
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