| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1896 |
|---|
| Symbol | |
|---|
| ID | 4258776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 2239815 |
|---|
| End bp | 2240597 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638122551 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_737942 |
|---|
| Protein GI | 114047392 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.154307 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTAATCC ATCAGCAATA CCATCGTCAT GGCCCCGATT ATCGCTTTGG GGAGCAAATG
ACTTTTCTCG ATGTGAAGCA AACATTTGGT TTTAGCCATG TACGTGTGGG ACGTTGGGTC
ACGCGCGAGG AGTCATTAAT TGCTGCGAAT TTGGTATTTG ATTCGCTGGC AGATCTTGCC
TTTATCCTCA ATTTACCGCC GTTGACCTTA GGGCTAAGGC AAACCTTAAG CCTTGCCTTT
GGCCATGGTG GGCAAAAGGG TGTGCAGGCA CACTATGCGC CAGGGGCGCG AGAATTGGCA
TTAGCGAAAA ATGCGGGAGC AGGAGCGCTG GCCCATGAGT TTTGGCATGC GTTTGACCAC
TATGTTGCCC CTAAGGCGTT TTCGCGCGCC ACGGGGCGTT TTAAGTGCGC CAGCGATCTC
TGGCTTGCGG ATCAGCCGCT CATTGAGCAT CCGCTAAATC AGCGTTTAGC CGAAATTTTT
CGAGTGACAT TACTCTCCGA GGACAATTTA GAGCCGAGTG ATTATGTCCG CCGCGCAATA
GCTTTAGATA AGCGTTATGG CGCGCAGTAT TTTGCTAAGC CGACGGAAAT GATGGCGAGG
GCCTTTGAGG CCTGTATCGA ATCCTATCAA GGGATCCAAA ATCCCTATTT AGTCTCTGGC
ACGCGCTATT CAGCGCTGGC AAAGGAAGGG GCCTACCCCG ATGAGCCACA TAGACAACGT
ATCTTCAATG CCTTGATTGC CTACTTTGAG CCATTAGGCA TGGCGTTAGG GAAAACCGGA
TAA
|
|---|
| Protein sequence | MLIHQQYHRH GPDYRFGEQM TFLDVKQTFG FSHVRVGRWV TREESLIAAN LVFDSLADLA
FILNLPPLTL GLRQTLSLAF GHGGQKGVQA HYAPGARELA LAKNAGAGAL AHEFWHAFDH
YVAPKAFSRA TGRFKCASDL WLADQPLIEH PLNQRLAEIF RVTLLSEDNL EPSDYVRRAI
ALDKRYGAQY FAKPTEMMAR AFEACIESYQ GIQNPYLVSG TRYSALAKEG AYPDEPHRQR
IFNALIAYFE PLGMALGKTG
|
|---|
| |