| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1893 |
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| Symbol | |
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| ID | 4258773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2233806 |
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| End bp | 2236631 |
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| Gene Length | 2826 bp |
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| Protein Length | 941 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638122548 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_737939 |
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| Protein GI | 114047389 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01782] TonB-dependent receptor |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.175561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCTC CAATCGCTCG ACAATTAGGT TCTCTGCTAC CACAACAAGC GCATCCTGTC
GCTAGGGTCC ACAAACGTCT CACGTCGCGT CTCTCAGCCT TAAGCTTAGC CATGGTGCTC
GCAGGCCTGA GTCACAATGC TCTCGCCATA GGCAAACTTG AGGGGCAAAT TCGCGATAAC
AGCAGCCAAC AACCCCTTGC AGGTGCAACC GTCACCTTAA AAGAGCTCAA CCTTAGCCAG
CAGGCAGGCC GTGATGGCCG TTTCTTTTTT GTCGGCGTGC ACGATGGCGA TTACACCTTA
GTGGTCAACT ACCTAGGGGC GATGCCAACC GAGCATAGGA TCAGCATCCG CGATAAACAA
ACCACACTGC AAGACATCAA CTTAAATAGC CAAGATGTCG AGCATATCCG CGTGGTCGGC
CAACAAGGCG CATTAAGTAA ATCCATGAAC CGTCAACGCG GCGCCGATAA TGTGCTGAGC
GTGGTCAGCG CCGATGTGCT GGGGAATTTC CCCGACAGCA ATATCAGTGA ATCACTGCAA
CGGGTGCCAG GGCTATCTAT CGAGCGGGAT CAGGGCGAAG GTCGCTTTGT ACGCGTGCGC
GGTATGGCAC CGGACTATAA CTCAGTATCG ATGAACGGCA CGCGCTTACC CTCACCCGAA
AGCGATCGCC GTGCGGTTGC CCTCGATGTA GTGCCATCGG ATCTATTGCA ATCGGTAGAA
GTGAGTAAAA CCTTAACACC GGATATGGAT GCCGATGCAC TGGGCGGCGC CATTGAGGTC
AAAAGTCTGT CGGCCTTCGA TCGCGATGAT ACTTATCTCA ACCTCAACGC CGAGGCGAGC
CAAGATACCT TAACCGACAA TACCAATCCC AAACTTGCCG CCAGCTACAG CGATATCTTT
GCCGACAAGC TAGGGGTAGC CATAGGTGCC AGTTGGTATA ACCGTGACTT TGGCTCAGAC
AACGTCGAAA CCGGCGGTAA ATGGGAATTT GCCGGGGATA ACGGCTTTGA GGATGCGGCG
CTTGAATCCG TCGATGCACG GGATTATGAA ATCAATCGTG AACGTTTAGG CATAGGGGTG
AACTTCGATT ATCGCCCGAG CGATGATACC GATCTGTATC TGCGAACCCT TTACAGTGAG
TTTGATGATA CCGAAACCCG CAACAGCGCT AAAACCAAGT GGAAATCGCC GCAGCAAGAA
AATGCCCTCG GCCAAGGCAA AACCACTCGC TCATTAAAAT CACGCACCGA GAACCAAAAC
ATCACCTCCT TTGTGCTGGG CGGTCAAACC CGCTTCGAAC GCTGGACCTT CGACTATCAA
GCAAGCCACA GCACCGCCAG CGCCGACAAA CCGCGGGATA TCGCCGGCGC CGACTTTGTC
GCCAAGATTG ATAACACGGG GTTTAGCAAT ACTAAACAGC CACAAATTAT CGCCCCCGAA
GACTATTACC AAAACGACAA TTTTGAATTA GATGAAATTG AAATCGCCGC CTCCAAGGCC
GAAGACACCA TCAACAGTGG CCAACTGGAT CTCACCCGCC AGTTAACCAT TGCGGATTAC
AGCGTCGAGC TAAAAACCGG CGTCAAGCTG AGCCGCCGCG ATAAATCCAA TCGCGAAGAT
ATTTGGATCT ACAGCGACTT AGGCGATCAA GGCGTGAGTG ATGAAGACTT GTTATTGAGT
CAATACGCAG GCAATGAGCT TGACTATGAC CTCGGCCGCT TTGGCAGCGG CATCAATGCT
GCGCCGCTAT GGCAGCTTAT CGACAGCCTC GATGCCGACA GCAATCGCGA TGATATCGAG
TCCACCATTA ACGATTTTGA TATCAGCGAA GATATCAACG CCGCCTACCT GATGGGCCAC
ATCGATATCG ATAAACTGCG TATCCTAACT GGGCTGCGTT TCGAGCAAAA TCAATGGGAC
TCTAGTGGCT ACGGTTACGA TGGCGCCAAG GGCGAGTTTA TCGATATCAA GCATTCGCGC
GATGAAGATC ATTGGCTGCC TGCACTGCAC CTCACTTACC GCTATAGCGA CAATACCGTG
CTGCGCGCCG CTTGGACCAA CACCTTAGTG CGCCCAACAT TCGGCCAATT GGCGCCGGGA
TATTTGCTCG AAGAGGATGA TGGCGATATC GATTTAACCT TTGGCAATCC ACAACTTAAG
TCGCTCGAAT CGATGAACTT TGACTTAAGC CTCGAGCACT ATTTTGGCAA TATCGGCTTA
ATTTCGGCGG GGCTGTTTTA TAAAGATATC GACAACTTTA TCTATCAGGC GGATTTAGCT
GGCCGTGGCG ATTATATCGA TGCCCATAGT GCCGTCACCT TTGTTAATGG CGATAGCGCC
GACATCTACG GCGTGGAGCT CAGTTATGTG CAAGAGTTTA ACTTTTTGCC CGAGCCCTTT
AATGCGCTGG TGCTCAACTC TAACCTCACT TACACAGATT CCAGCGCCAA GATCAATTGG
CAAGAGGATG GCCAATTACT GAGCCGTGAT ATTCCGATGC CAAGCCAATC GGATCTCACC
GCAAACCTGT CGCTTGGCTA TGAAAACAGC TACGCCAGTG TCTGGTTATC GGCGGCCTAT
AAATCCGAAT ATTTACAGGA AGTCACTGAG CTCAGTGATG AGCGCTACGA TCTCTATCAA
GACAATCATT TGCAGTGGGA TTTTGTCGCC AAGGCACATT TAACCAGCAA TTTAACCTTG
TATTTCAAAG GGGTGAACCT GACCGACGAG CCCTACTACA GCTACACGGG TGACAGCAGC
TATAACGCCC AATACGAAGC CTATGGCCGC ACTTTCCAGT TAGGCGTGCA GTACACCAAC
TATTAA
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| Protein sequence | MQSPIARQLG SLLPQQAHPV ARVHKRLTSR LSALSLAMVL AGLSHNALAI GKLEGQIRDN
SSQQPLAGAT VTLKELNLSQ QAGRDGRFFF VGVHDGDYTL VVNYLGAMPT EHRISIRDKQ
TTLQDINLNS QDVEHIRVVG QQGALSKSMN RQRGADNVLS VVSADVLGNF PDSNISESLQ
RVPGLSIERD QGEGRFVRVR GMAPDYNSVS MNGTRLPSPE SDRRAVALDV VPSDLLQSVE
VSKTLTPDMD ADALGGAIEV KSLSAFDRDD TYLNLNAEAS QDTLTDNTNP KLAASYSDIF
ADKLGVAIGA SWYNRDFGSD NVETGGKWEF AGDNGFEDAA LESVDARDYE INRERLGIGV
NFDYRPSDDT DLYLRTLYSE FDDTETRNSA KTKWKSPQQE NALGQGKTTR SLKSRTENQN
ITSFVLGGQT RFERWTFDYQ ASHSTASADK PRDIAGADFV AKIDNTGFSN TKQPQIIAPE
DYYQNDNFEL DEIEIAASKA EDTINSGQLD LTRQLTIADY SVELKTGVKL SRRDKSNRED
IWIYSDLGDQ GVSDEDLLLS QYAGNELDYD LGRFGSGINA APLWQLIDSL DADSNRDDIE
STINDFDISE DINAAYLMGH IDIDKLRILT GLRFEQNQWD SSGYGYDGAK GEFIDIKHSR
DEDHWLPALH LTYRYSDNTV LRAAWTNTLV RPTFGQLAPG YLLEEDDGDI DLTFGNPQLK
SLESMNFDLS LEHYFGNIGL ISAGLFYKDI DNFIYQADLA GRGDYIDAHS AVTFVNGDSA
DIYGVELSYV QEFNFLPEPF NALVLNSNLT YTDSSAKINW QEDGQLLSRD IPMPSQSDLT
ANLSLGYENS YASVWLSAAY KSEYLQEVTE LSDERYDLYQ DNHLQWDFVA KAHLTSNLTL
YFKGVNLTDE PYYSYTGDSS YNAQYEAYGR TFQLGVQYTN Y
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