Gene Shewmr7_1882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1882 
Symbol 
ID4256841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2221010 
End bp2221522 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content48% 
IMG OID638122537 
ProductCheW protein 
Protein accessionYP_737928 
Protein GI114047378 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.3321 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAACC GCACGAACAC GGTGAGTAAG CAGGAATACA GCGTCCACGA TGAGGTCGAG 
TTTTTAAGTT TTGTGCTGGG TGAAGAACAC TATGCGCTCG ACATTATGTC GGTGAAGGAG
ATCCGTGGGT ATGAACTCGT CACCAAAATC GCCAATGCGC CGAGTTTTAT CAAAGGCGTA
CTGAATCTTA GGGGCGATAT TGTACCTATT GTCGATTTAA GGATGAAGTT TGCCGTGGGC
AGTGCGACCT ACAACGAGTT CACCATCGTC ATTATGTTGA ATGTGTTTGA CCGTATCGTC
GGGATTGTCG TCGATGCGGT GTCGGATGTG ATTAAACTCG CCGCCGAAGA AATTCTACCC
GCCCCCGAAT TTGGGGTGGC CTTCGATAGC CGTTACCTCA AGGGGCTGGC AACGGTAGAA
GACAAGATGA TCATTTTGGT AAATATACAG GCTCTGATCA GCAGTGATGA GCTGGGTCTA
ATTGATGCAA ATAGTCTGTC TGATCAGGAG TAA
 
Protein sequence
MDNRTNTVSK QEYSVHDEVE FLSFVLGEEH YALDIMSVKE IRGYELVTKI ANAPSFIKGV 
LNLRGDIVPI VDLRMKFAVG SATYNEFTIV IMLNVFDRIV GIVVDAVSDV IKLAAEEILP
APEFGVAFDS RYLKGLATVE DKMIILVNIQ ALISSDELGL IDANSLSDQE