Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1881 |
Symbol | |
ID | 4256840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2218785 |
End bp | 2220995 |
Gene Length | 2211 bp |
Protein Length | 736 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638122536 |
Product | CheA signal transduction histidine kinases |
Protein accession | YP_737927 |
Protein GI | 114047377 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.254979 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATTA ATATGGCAGA GTTCCATCAG GTTTTTTTTG AAGAAAGCCA CGAACATCTT GAAAATATGG AGCAATTGCT CCTTGCATTA GATTTAGACG CCCCCGATCC CGAAGAATTA AATACCATTT TTCGCGCTGC TCATTCGATT AAAGGAGGCA GTGGCATCTT TGGTTTTACC GCGCTTACCA GCGTGACCCA CGTAATGGAG AATTTGCTCG ATAAGACCCG TAAGGGCACG TTTGAGCTTT CCTCCTCAGT GATTGATCTT CTGCTTCGTA CCGTCGATAC CCTTTCACAT ATTTTAAACC TCTATCGAGA AGAGGAGCCC ATCGATTGGC AACAGGTGGA GTTTGCTAAA AACCAGCTGG TGGCGGTCTT AAATGGCGAA CCCTTTTCTA CTCAAACCGC CAATGCGGCA AATGGGGTGA GTGCCGCTAA TCCCAATACC AATAATCAGA CCGAAGACAA ACCCTTACAA GCTGCGGTTA CGCCAAGCTT GGCTAGTCAA TCAGTAGACG ATAGCTTCGG TTTTTTTGAG GATGAAGTGG AGCTTGGGTT AGTCGATGAA ACGGAACATT TCGGCTTTTT TGATGAGGCT TATACCGCAA AGGAAATCCG CGCCGAGGAT ATTAATGCCA AGCCTTCAGC GGTGCTTAAG TCCAGTACGA ACGAACATAT TGCCGTTAAT AAAGCAGCGC CAGTAAATGA AGACTCGGCA GTAAATGGTT ATGGACTGGA TGATGAACTG GGCTATGGCT TTTTTGAGTC ATTAACACCC GAGACATTCG CCAGTGAAAT CGATGCCTTA ACCTCAGCAT CGGCAAAAGC CAATCCAATG AAAGATGCGA TATCGCCCCT TGATGTACAG ACTGAAAGCT CAACATCGAA GCCGACTCGA GCGAAAAAAC AGTCAAAGGA GGCAAAGCTA CTCCAAGCAA ACACCAGTAC TAACGCAGAG ACAACGCAAC TACTATCTTC CTCTGCTGCA ATCAGCGCAG CACCAGCCAG TAGTAACCAA CCCGCAGCGA AAAAGGCCAG TGCCGCCAGC CAAGATGCCA CGTTGAGGGT AGAAACCTCC AAGATAGATA CTCTAGTTAA TCTTGCGGGT GAATTGGTGA TCACCCAATC CATGCTCACC CTTATCGGTA ATGAGCTGGG CGGCGAATTA GGTGAGCGGC TAAAAACGGC GCTTAATGAG TTAGAACGCA ATACCCGGGA AATGCAGGAA GCTGTCATGT CGGTGCGCAT GTTACCCGTG TCGTTCGTGT TTAACCGTTT TCATCGACTG GTGCGGGATT TATCGGATCA GCTTGGCAAA AATGTCAGTC TGGTGATTGA GGGTGGCAAC ACTGAAATTG ATAAGGGGAT GATTGAAAAG TTAGTCGATC CGCTCACCCA CCTTGTTCGT AACAGTCTTG ACCATGGTAT TGAAAAACCA GAAAAAAGAC TTGCAGCAGG CAAAAGTGAA GCCGGTGTCT TGTCCCTTAA AGCCAGTCAG CGCGGCGGCA GTATAGTGAT CGCCGTCCAC GATGATGGCG GCGGGTTAAA CCGCGAGCGC ATTTTACAAA AGGCCCGGGA AAATGGCATG GCACTGCCCG AGAACATGAC GGACAAACAA GTGTGGCAAT TGATCTTTGC AGCAGGGTTC TCAACGGCGG CTGAGGTTAC CGATGTCTCG GGTCGCGGCG TGGGTATGGA TGTGGTACGC AAGAATATTG AGGCCTTAGG TGGTCGCATC GATATTGATT CCGTTGCGGG TCAGGGCGCG ACCTTCGAAA TCCAACTTCC CCTTACCTTA GCCATTGTCG ATGGCATGAG CGTCAGCGTA GGCAATCAAA TCTATATCTT GCCCTTAGTA CACATTATCG AATCGATACA ACCACAAACT GAGCAGCTTA AATTTTTGGC TAAAGAGCGG TTACTCAGGG TGCGGGAAGA ATATTTACCC CTGCTAAACC TCTATCAATT AATGGAAATT GAACCTCAAG CCAAGACGCC TGAAGCTGGC ATAGTGGTCT TGCTCGAAAG CAATAATAAA CGCTTTGGCC TGTGTGTCGA TGCTCTCGTC GGGCAGCAAC AAGTGGTGAT CAAGAGCCTT GAAAAACACT ATCGGCGGAT CCCCGGCGTA TCGGGGGCGA CCATCATGGG CGATGGCAGC GTGGCCTTGA TCCTCGATGT TGAATCACTT GCACTGCATA TCAAAAATTA A
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Protein sequence | MSINMAEFHQ VFFEESHEHL ENMEQLLLAL DLDAPDPEEL NTIFRAAHSI KGGSGIFGFT ALTSVTHVME NLLDKTRKGT FELSSSVIDL LLRTVDTLSH ILNLYREEEP IDWQQVEFAK NQLVAVLNGE PFSTQTANAA NGVSAANPNT NNQTEDKPLQ AAVTPSLASQ SVDDSFGFFE DEVELGLVDE TEHFGFFDEA YTAKEIRAED INAKPSAVLK SSTNEHIAVN KAAPVNEDSA VNGYGLDDEL GYGFFESLTP ETFASEIDAL TSASAKANPM KDAISPLDVQ TESSTSKPTR AKKQSKEAKL LQANTSTNAE TTQLLSSSAA ISAAPASSNQ PAAKKASAAS QDATLRVETS KIDTLVNLAG ELVITQSMLT LIGNELGGEL GERLKTALNE LERNTREMQE AVMSVRMLPV SFVFNRFHRL VRDLSDQLGK NVSLVIEGGN TEIDKGMIEK LVDPLTHLVR NSLDHGIEKP EKRLAAGKSE AGVLSLKASQ RGGSIVIAVH DDGGGLNRER ILQKARENGM ALPENMTDKQ VWQLIFAAGF STAAEVTDVS GRGVGMDVVR KNIEALGGRI DIDSVAGQGA TFEIQLPLTL AIVDGMSVSV GNQIYILPLV HIIESIQPQT EQLKFLAKER LLRVREEYLP LLNLYQLMEI EPQAKTPEAG IVVLLESNNK RFGLCVDALV GQQQVVIKSL EKHYRRIPGV SGATIMGDGS VALILDVESL ALHIKN
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