| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1874 |
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| Symbol | |
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| ID | 4256833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2209526 |
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| End bp | 2210581 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638122529 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_737920 |
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| Protein GI | 114047370 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.982887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACG CAAACCCTCA AGCCCCTCAA GATAATATGC GTAAAAAACG CAGCGTGTTG
CTGATTGTGG TTCCCCTGTT ATCTGTTTTG GCCATAGGTG CGGTTTATCT GCATGGCGGC
CGCTACATGG AAACCGATAA CGCCTATGTG AAGGCGGATA AAGTCCCCGT GAGTGCTCAA
GTGGCTGGGA ATGTGGACAA CTTGTATGTG GTGGAAAACC AACGGGTTGA AAAGGGGCAA
GTGTTGTTTC GCCTCGACGA TGCCATGTTT AAGGTGATGG TCGATAAGGC AAGCGCCAAA
CTGGCGCAGG TCAAAACCGA TTTAGCAGTA CTCAAGGCGA GTTACCATGA GAAACAAGCC
GAAATTACCC TAGCTGAAAC CAAGTTAGCC TTTGCCGAGA AAGAGCAAAA GCGGCAGGAG
AATTTAATCG GTAAACACTT TGTGTCCGAA TCTCAGCTTG AAGATGCAAG ACAAAATACC
GATATTGCGC GGCAGAATAT TCAGACCCTG CAAAAAGATT TACACCGCAT TGCCGAAAGC
TTAGGCGGCA GCCCCGATTT TCCGATTGAA CAACATCCCA GTTATTTAGA AGCTTTAGCC
CAATTAAATG AAGCCAAGCT AGATTTAAGC CGCGTGGAGA TTAAAGCCCC AGTATCAGGC
GTCGTTAGCC AACTGCCTAA GTTGGGACAA TATGTGAATG TCGGCGCCAT CGCTTTAGCG
CTGGTGGCCG ATCATGCCCT CTGGATTGAG GCGAACTTCA CCGAAACCGA TTTAACCCAC
GTCAAACCCG GACAAAAGGT CAATATCCAT ATCGATACCT TTCCCGACAA TCGCTGGCAA
GGTACGGTCG AGAGTTTAAG TCCGGCAACG GGCGCTGAGT TCTCGCTGAT CCCCGCGCAA
AATGCCACGG GCAACTGGGT GAAAATCGCC CAGCGGGTTC CGGTGCGAAT TGCCATTGAT
ACTGTGTTAC CCGAGGCGCC GCTGCGTGCT GGATTAAGCG CCGTGGTGGA TATCGATACT
GAATATCAAC GCCAGTTATT GGGTTTTAGT CTGTGA
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| Protein sequence | MSDANPQAPQ DNMRKKRSVL LIVVPLLSVL AIGAVYLHGG RYMETDNAYV KADKVPVSAQ
VAGNVDNLYV VENQRVEKGQ VLFRLDDAMF KVMVDKASAK LAQVKTDLAV LKASYHEKQA
EITLAETKLA FAEKEQKRQE NLIGKHFVSE SQLEDARQNT DIARQNIQTL QKDLHRIAES
LGGSPDFPIE QHPSYLEALA QLNEAKLDLS RVEIKAPVSG VVSQLPKLGQ YVNVGAIALA
LVADHALWIE ANFTETDLTH VKPGQKVNIH IDTFPDNRWQ GTVESLSPAT GAEFSLIPAQ
NATGNWVKIA QRVPVRIAID TVLPEAPLRA GLSAVVDIDT EYQRQLLGFS L
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