| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1872 |
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| Symbol | |
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| ID | 4256831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2207719 |
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| End bp | 2208747 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638122527 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_737918 |
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| Protein GI | 114047368 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.97558 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCTT CTGCTGCAAA TAAAGAGCTC GATTCTGCGG CGCAAATTTT GCGATTAGCC
GTACCACAAA TGTCCGCGCT CGATATTCCC GTGACCCCTG AAAACTACAC GGTTTGGTAT
GAGTATTTTG CCCAGTCAAA CCTCGACTTA AATCGCGCTA TCGACGGTTT TCTGGCAAAC
AAAGTGGTGT TTACTAAGGA GGTAAATACC AGTCTATACA AGAACTTTAT CCAAGAAAAA
TCCCCTGAAG TCATCGAAAA CGTCCAAATC GAAACCCAGA TATTAATCAA CTCGCTGATC
AGTAAAATCA CCCAGTTAAA TCAAGGGACA GAGGCATTTT CAAGCACCTT GGCTGACTTT
GGTCTTCAGC TACAGACCAA GCACGACGTG GGCACGCTCA ATCAATTAGT GGATGGGGTA
ATAGATGAAA TGCAAAGTCT ATTACTCAAT AACCAAAATA TGGAGCAGAG CTTAACGGCC
ATGGGGCAAG AGGTGCAGAA CTTAAAAGCC GAAATGGAAA ACTTAAGTTT GGCGGCAATG
ACGGATCAAT TAACCTCATT GCATAACCGC CGCGCCTACG AGATTGCCAT TCAAGATCAT
ATCCACCGCG CCGAGGAACA ACAAACCCGT TGCAGCCTAT TACTGATTGA TATTGACCGC
TTTAAATTGT TTAACGACAC CTATGGCCAT CAAGTGGGGG ATAAGGTGTT AGCCTATGTC
GCGCTCGCCC TCAAACAATG TGTGCGGGGC GATGACTTTG TCGCCCGTTA TGGCGGCGAG
GAGTTTGTTG TTCTGCTGCC AAACACTCAT TTCCACGATG CACTCCAAGT GGCCGAGACC
TTAAGGGAGC GGATCTCCGA GCGGCGTTTA GCCATAGGCA AAGATAAAAA ACTCTCACTG
GGCGCGATTA CCGTATCTAT CGGCTTAGCC TCGTTGCAAA AGGGGGATGA TGCGGAAACC
TTATTCAGCC GAGCGGATAA AGCCTTGTAT GAGGCCAAAT CCGATGGCCG TAACTGTGTT
CGTGGCTAA
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| Protein sequence | MSSSAANKEL DSAAQILRLA VPQMSALDIP VTPENYTVWY EYFAQSNLDL NRAIDGFLAN
KVVFTKEVNT SLYKNFIQEK SPEVIENVQI ETQILINSLI SKITQLNQGT EAFSSTLADF
GLQLQTKHDV GTLNQLVDGV IDEMQSLLLN NQNMEQSLTA MGQEVQNLKA EMENLSLAAM
TDQLTSLHNR RAYEIAIQDH IHRAEEQQTR CSLLLIDIDR FKLFNDTYGH QVGDKVLAYV
ALALKQCVRG DDFVARYGGE EFVVLLPNTH FHDALQVAET LRERISERRL AIGKDKKLSL
GAITVSIGLA SLQKGDDAET LFSRADKALY EAKSDGRNCV RG
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