Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1853 |
Symbol | |
ID | 4256710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2179114 |
End bp | 2182818 |
Gene Length | 3705 bp |
Protein Length | 1234 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638122510 |
Product | exodeoxyribonuclease V, gamma subunit |
Protein accession | YP_737901 |
Protein GI | 114047351 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAGT TAATCCAATC CAATCAAATG GAAGTGCTCT GTGCCCATCT TGCCGCGTAT TTACGCCAGC CGCTACCCGG CGCGGGGTTA TTGCAAAATG AGCATATTTT GGTGCAAAGC CCCGGGATGT CGACTTGGTT ACGCCTTGAA ATTGCAAAAC AAAATGGTAT TGCCGCCGCG CTGGAGTTCC CGCTACCTTC CAGCTTTATT TGGCAACTGT GCCACGATTT ACTCCCCAAT GTCCCCAAGG AAAACGCCTT CACTAAGGCG GCAATGACCT GGAAGCTGAT GCAACTACTG CCGCGGCTAC TGGATGAACC TTCCTTTGGG CCACTGCGCC ATTATTTGGG TCATACCTTA GATAATCTGG AATCGAGCGC GGCTGACACC CATAGCAACC ATCAACATGG TGCCGTAAGC GCCGATGATA TTAAGCTTTA CCAACTTTGC GGCCGCATCG CCGATATCTT CGACCAATAT TTGGTTTACC GCCCCGACTG GATTGCCGCG TGGGAAGCCA ATGAACCGCT TGAGTCACTC AAATTGAATG AGGAGCAAAG CTGGCAACCC ATCCTCTGGC GCGCGCTGAT TGCCTACAAT CGCGATGAGC TGCGTCAAAG CCACTACCAC AGGGCCAATC TACATCAGGA TTTGATTGCT GCATTGGGGG ATAGCACCAA TTCCCTCGCA AAATTGCCGC AGCGTTTATT TGTGTTTGGG ATCTCCTCCA TGGCGCCCCA AACCATCGAT GTGCTCCACC AGCTCGCGAG CCGTATCGAT GTGATTATCT TAAGCCTTAG CCCCTGTCAG CATTACTGGG GCGACATTAT CGACCCACGC CATCGGGCGC GTATGGCATT GCAATATGCC GGAAAACGCC AATTAGCCGA GCAATGGGAA GATAAACTCG AAGTCGGCAA TCCCCTACTC GCCAACAATG GCAAGATGGG CCGCGAATTA CTCGATATGC TGCTCGAACT GCCCCCAGAG CACTGTGACT TTGGCGACGA TGTGTACTGC CAGCCCTGCG GCGATCCTAA CGATCCCCAC GCTCGCGCCA GCATGCTAGC CGGGGTGCAA TACGATATTT TAGAAATGCA GACACTCGAT CGGGTACTCG GGCCAGATGC TGAGCTATAT CAAGAGGTCG CGAATCGCCG AGTATTAACA GCCGACGATG ATTCGATTCT AATCAAGAGT TGCCACAGCC CACTTAGGGA AGTCGAAACC CTGCACGATC ATTTACTCGA CCTGCTGGAT AGCGACAACC AACTCACGCC CAAAGACATA GTGGTCATGA TGCCGGATGT CGCCGCCTAC GCCCCCTATA TCGATGCGGT GTTTGCAGCC AAACAGGGAC TGGAATATAT CCCCTACGCC ATTGCCGACC GCGGCGCGGC GCAGGAATCG CCACTCATAA ATAGCTTTTT GAATTTACTC AATATTAATC AGAGCCGTTT CGGACTGACG GATATTTTAA GCATTCTCGA AGTCCCAGCC ATTTTGCGAC GTTTTCAGCT CGAAGAAGAC GAGCTGCCAC TCATTCGCCG CTGGTTAGAT GAAGCCGGTG TGCGTTGGGG CCGCGATGAA CAGAGCCGCC TTAAACAGGG CGTGCCTGCC TTCGAGCAAA ACTCCTGGGC CTTTGGCATA AAACGCTTAA TCTTAGGCTA TGCCTTAAGG GACGATGCGC CGCTATATCA ATCATCTCCG CAGGGAATGC ACTATTTAAC GGTTGCAGGG GTGGAGGGGC AATCGGCACA GGCCCTTGGC AAACTGTTGA ATTTTATTGA AGTCCTCGAT GAGACCACCC AAGTATTAGC CAAGGCGCAA GCGCCCTCAC TGCGGTTACT CGAACTCACC GAGCTGTTAA ATGCCTTTTA CGCCCCCGAT GAGGACGAAC GAGAGCAGCT GCAAGAAATT CGCGATGCGA TTGCCGCCTT AGAGCAAGAG CTGCTTGCCG CGAGCCCAGC CGATATGGGC CCACAAGCCA ACGACTTAGA TTTAAGCATC GAAGTACTGG CGCTTTGGTT TAATCAACGC TTAACCGAGT CACGTGTCGG CCAACGATAC CTCGCGGGCA GCGTAAATTT TTGTACCTTA ATGCCGATGC GCTCGATTCC CTTCAAGGTC GTTTGCCTGC TGGGGATGAA TGATGGTGTC TATCCTAGGG TGCAACATCC AGTGGGCTTT GACCTGATGG CCCATTTTGG TGCGCGCAAA GGCGATCGTT CCCGCAGATT AGATGATAGA TACCTGTTTT TAGAGGCGTT ACTCTCGGCG CGGGAGCTGC TTTACATCAG TTATATTGGC CGTAGCGAAC GGGATAACTC GGAGCGTATT CCATCTATGC TTGTCTCCGA GCTAATAGAA TATTGCCAGT TATGTTATCT GCCTGAATCC CTTGCGGCAG AAGCTTCTAC TGTCAGTAAC GAAGTCGCCC AACAGGCATT ACTTGAGGCT ATTGTGAGCC ATCAGCCGCT GCAACCTTTT GATCCTAAAC TGTATCAAGC AGCACTGCCG CAAGCCCCCA CCTTCCACGG GATAAAACAG AGTTATAGCC AGCAGTGGTG TCCGCCCGAT AGTCACAGTC AGTTGCATCA TGGCCGATTT ATTGAAGCCC ATACCCAGAT AGTGCTCGAA GATGACGCAA TTGGTGATAG TGTTCAGGAT ATTGAGCCCC TTGGCGAAGC TGAGCATGTC GATATCTCGG CCTTTATTCG CTTCTTTCGC AATCCCGCGC AGTATTTCTT TAATCGTACC CTGAAAGTCG ATTTAAACCT GAATATTCAA GCGGATGACA ACGATGAGCC CTTTAGTCTT AATGCGTTAG AGCGTTATTT ATTACAGGCT CAACTCCTTG GCGATGCGCT TGAGCAAGGG CAAAACGAAC CCAGCGCTGA ACTGTTACAA CGCCTTAAGG CCAGCGGTAA TTTGCCGATG CAGCCCTTTG ATGATCTGCT GCTGCGCCAA TACAGCCATG ATATTGCGCC GCTGATTGGC AGAACCCTGT TTATGCGCGG CGATGTCGCT CCCCGCCATG CCGATATTCG GCTCAGCTTT GAGTTACCCC ACCAGAACGC TGGGTCTCAG TTAAAAGCCA AGCGGGTGAT CCTCGAAGGT CGAATCGATG ATATCAGCCC TAAGGGATTG GTCACTTGCC GCCCCGGCAG TGCCCATGGG CGGGACATTT TAGCCTTGTA TTTGCGTCAT TTATGTTTGA TGGCCGCAGG AGTGGCTCAA CCTAGCTACC TGCAACCTAG CTATCTGCTG GATATGGGGC ATTTTCATGC CCTCGCGCCC ATTACGCCAG CGCTTGCCCA TGCGCAGCTC GCCAACTTAT TACAGCTTTT TTATCAGGGC CAAATTCATC CCCTGTGTTT TATGCCAAGA ACCTCCCTCG CCTATGCCAG CGCTGAGGCG GATGAAGAGG AAGACCCACA CACAAGCAAA GACCCGCACA AAGCCCGGCT CGAAGCGGCC CAAAGCGAAT GGCTGGACGA GCAAGGTGAA CTTGGTGAAG GCACAGATCC CCATTATCAG CGGCTGTTTC ATTTTCCCGA CGACTTTACC GAGGCACATT TTGGCAAACT CGCCGATGAC ATCTATCGGC CAATGCTTAG CCTGTATCAC AAGGATACCC TCGCCCAACT CGAGGAATTT GCCCTGAATG AAGCCCCAAC CGCCACAACA GAGGGAGCGC ACTGA
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Protein sequence | MLKLIQSNQM EVLCAHLAAY LRQPLPGAGL LQNEHILVQS PGMSTWLRLE IAKQNGIAAA LEFPLPSSFI WQLCHDLLPN VPKENAFTKA AMTWKLMQLL PRLLDEPSFG PLRHYLGHTL DNLESSAADT HSNHQHGAVS ADDIKLYQLC GRIADIFDQY LVYRPDWIAA WEANEPLESL KLNEEQSWQP ILWRALIAYN RDELRQSHYH RANLHQDLIA ALGDSTNSLA KLPQRLFVFG ISSMAPQTID VLHQLASRID VIILSLSPCQ HYWGDIIDPR HRARMALQYA GKRQLAEQWE DKLEVGNPLL ANNGKMGREL LDMLLELPPE HCDFGDDVYC QPCGDPNDPH ARASMLAGVQ YDILEMQTLD RVLGPDAELY QEVANRRVLT ADDDSILIKS CHSPLREVET LHDHLLDLLD SDNQLTPKDI VVMMPDVAAY APYIDAVFAA KQGLEYIPYA IADRGAAQES PLINSFLNLL NINQSRFGLT DILSILEVPA ILRRFQLEED ELPLIRRWLD EAGVRWGRDE QSRLKQGVPA FEQNSWAFGI KRLILGYALR DDAPLYQSSP QGMHYLTVAG VEGQSAQALG KLLNFIEVLD ETTQVLAKAQ APSLRLLELT ELLNAFYAPD EDEREQLQEI RDAIAALEQE LLAASPADMG PQANDLDLSI EVLALWFNQR LTESRVGQRY LAGSVNFCTL MPMRSIPFKV VCLLGMNDGV YPRVQHPVGF DLMAHFGARK GDRSRRLDDR YLFLEALLSA RELLYISYIG RSERDNSERI PSMLVSELIE YCQLCYLPES LAAEASTVSN EVAQQALLEA IVSHQPLQPF DPKLYQAALP QAPTFHGIKQ SYSQQWCPPD SHSQLHHGRF IEAHTQIVLE DDAIGDSVQD IEPLGEAEHV DISAFIRFFR NPAQYFFNRT LKVDLNLNIQ ADDNDEPFSL NALERYLLQA QLLGDALEQG QNEPSAELLQ RLKASGNLPM QPFDDLLLRQ YSHDIAPLIG RTLFMRGDVA PRHADIRLSF ELPHQNAGSQ LKAKRVILEG RIDDISPKGL VTCRPGSAHG RDILALYLRH LCLMAAGVAQ PSYLQPSYLL DMGHFHALAP ITPALAHAQL ANLLQLFYQG QIHPLCFMPR TSLAYASAEA DEEEDPHTSK DPHKARLEAA QSEWLDEQGE LGEGTDPHYQ RLFHFPDDFT EAHFGKLADD IYRPMLSLYH KDTLAQLEEF ALNEAPTATT EGAH
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