| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1851 |
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| Symbol | |
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| ID | 4257264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2173176 |
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| End bp | 2175308 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638122508 |
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| Product | exodeoxyribonuclease V, alpha subunit |
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| Protein accession | YP_737899 |
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| Protein GI | 114047349 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAGCA GCGCACTCAA TCCCCCTAAA GCCCCATCAA TCCCATGGGT CGAAGCTGGC
GCGCTCAGAC TCAAGGCGCC GCTCACAAAG CTACTCAAAT ACTGGGAAAA GGAGCGGCTG
ATCACCCCGC TCGATCGCCA TTTTGCCCTC GAGATGGCAA GGCTTCATCC CAATGACGCC
CAAGAGCCGC TGTTTATGCT GCTTTGCGCC CTGTTAAGTC AACAGCTCTC GGCCCAACAT
ACTTGCCTAG TGCTCGAACA TATAGTGCCA GCCAATCCGC TGGCAGAGCC GGTTAATCAC
TGCCAGATCC GTTTGAGCCT GCCAGAGCTG ATTGCAAGGC TGGAAAATTT TGAGGCGGTT
GGTGAACCTC ACAGCAATAA GCCACTGATT TTTGATGGCG GCCGACTCTA TCTTGAGCGT
TATCATCATT TCGAAACCGA GGTGGCCAGC GCCCTGACGA GGCTATCTTC GAGTCAACCC
GTCAACAACA CCGATAAAGA TTCAGATGCG CCGCTACGCA GGCAGCTCGA TTACTTATTT
CCAAACGCCG CATCTTCCCA TGCAACATCA GCCCTTGAGA CTAATATCGA CTGGCAAAAG
GTGGCGACGG CAACGGCGCT CGGCAAGAAG CTGGCGGTGA TCACCGGCGG CCCAGGCACA
GGCAAAACCA CCACAGTAAC TAAATTACTC TTGTTACAGC AATTAGACTC ACCAAAACAG
ATAAGACTCG TCGCCCCGAC GGGCAAGGCC GCCGCCCGAT TAAGTGAATC GATAAAGGCC
TCGAAAGCAA GACTCGAGCT GGAGCTCAAA CAGGCTCAAG CGACAAACGA GCAAGTACAC
AGTCACGAAA CCCAAGCGCT GTTAGCCGCG CTCAAGCAAG TGCCAGAAGA GGCATCAACC
TTACATCGTC TGCTGGGGGT TATCCCCAAT TCGGCGCAGT TTCGTCACCA TCAAGGCAAT
CCCCTGCGGC TAGATCTCTT GATTGTCGAT GAAGCGTCGA TGGTCGATTT GCCTATGATG
TATAAGCTGC TCACGGCCCT TCCCGAACAG GCGGGTTTGA TACTGCTGGG GGATCAAGAC
CAACTCGCCT CAGTTGAAGC AGGCGCCGTG CTCGCCGATA TTTGCGCAGG GCTAAAATAT
GAGTCGGAAC ACGAGTCGGA ACAACACTCT GAATGGAGGA TGCGTTATAG CCAAGCTCAG
GCTGAGCAAT TGAGCAAACT CACCGGCTTT GATCTGCGTG CCTATATTCA TCGCGAGCCA
AAGATTGGCG ATAGTTTGTG TATGTTGACC CACAGCCACA GATTTAAGGG CGATGCCGGC
ATTGGCCTAT TAGCCAGTGC GGTAAATCGC TCCGATCTCG CGGGGATTTT GGCCGTATGG
CAACGGGGAC TGGCCGAGCT TACTTGGCTA GAACACAGTA TGGATCTGAG CCAGACCCAA
GCTAAAATCA GCGAGCCTGC AAACAACAGC GGCCTTCGTG CCCTGCTAAC ACAGGCCTGT
GAGCAATACG CCGAGTATTT ACGTCCGCTG CAAATTTCAG ATCCAAGCAG TGTGCCAAGC
GCCATCGAAG CCATTGCCCG CTTTAACCAA TATCGCATCC TATGCGCCAT GCGCAGTGGC
GATTATGGTG TCGAAGGTAT CAATCAAGCC GTGACTAAGG CGCTGTCTCA GGCCAAGCTT
ATCCATCCCC AGCAAGAGTT TTACCTTGGC AGGCCGATTA TTATCCAAAG CAACGACTAT
AACTTGGGCC TGTTTAACGG TGATATTGGT TTGATTTTGC AGGATGAAGA CAGGCCAGAG
CGCCTGATGG CCCACTTTAT CAAAGCCGAT GGCAAACTGC TTAAAGTGCT CCCCGCAAGG
CTGCCTAGCC ATGAAACCTG CTACGCCATG ACGGTACATA AAAGTCAGGG CAGTGAATTT
AATCGAGTCG CCCTCGTACT TCCGCCCAAT CCGAGCCTAG TACAGTGGCA ATTGCTCACC
AAGGAGCTGG TCTACACTGC TATTACCCGC GCAAAACAAC ACTTTAGCTG TTTAGGCACA
CAGCAAGTCT TTGAGCGCGC AAGCCAGCAA GCTACCCAGC GAGCCTCAGG TTTAGCCGAT
AGACTCTGGC GCGGTAACGC GATGACTGAT TAA
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| Protein sequence | MISSALNPPK APSIPWVEAG ALRLKAPLTK LLKYWEKERL ITPLDRHFAL EMARLHPNDA
QEPLFMLLCA LLSQQLSAQH TCLVLEHIVP ANPLAEPVNH CQIRLSLPEL IARLENFEAV
GEPHSNKPLI FDGGRLYLER YHHFETEVAS ALTRLSSSQP VNNTDKDSDA PLRRQLDYLF
PNAASSHATS ALETNIDWQK VATATALGKK LAVITGGPGT GKTTTVTKLL LLQQLDSPKQ
IRLVAPTGKA AARLSESIKA SKARLELELK QAQATNEQVH SHETQALLAA LKQVPEEAST
LHRLLGVIPN SAQFRHHQGN PLRLDLLIVD EASMVDLPMM YKLLTALPEQ AGLILLGDQD
QLASVEAGAV LADICAGLKY ESEHESEQHS EWRMRYSQAQ AEQLSKLTGF DLRAYIHREP
KIGDSLCMLT HSHRFKGDAG IGLLASAVNR SDLAGILAVW QRGLAELTWL EHSMDLSQTQ
AKISEPANNS GLRALLTQAC EQYAEYLRPL QISDPSSVPS AIEAIARFNQ YRILCAMRSG
DYGVEGINQA VTKALSQAKL IHPQQEFYLG RPIIIQSNDY NLGLFNGDIG LILQDEDRPE
RLMAHFIKAD GKLLKVLPAR LPSHETCYAM TVHKSQGSEF NRVALVLPPN PSLVQWQLLT
KELVYTAITR AKQHFSCLGT QQVFERASQQ ATQRASGLAD RLWRGNAMTD
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