| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1848 |
|---|
| Symbol | |
|---|
| ID | 4257262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 2171475 |
|---|
| End bp | 2172194 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638122506 |
|---|
| Product | DNA polymerase III, epsilon subunit |
|---|
| Protein accession | YP_737897 |
|---|
| Protein GI | 114047347 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
|---|
| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAATC GCGCCATGCC TTTGTTACAA TGCCGTCGTC TGAATGTTCT CAGACCACTA
ACATTGAACA GTGTGGAGCC AATGTCTAGA ACGCCAACCT ATTCGCCCGC AAATACCCTT
GTGGTACTCG ATTTTGAAAC TTCGGGGCTC TCACCCAATC AAGGGGCGCG CGCCATTGAG
ATTGGCGCAG TGTTGATTGA ACAAGGGCAA ATAACCGCGC GCTTTTCAGA ATTAATGAAT
CCAGGTTTTC GGATAAACAG TTTTATCGAA GATTACACCG GGATCAGCAA TCAAATGCTC
GCCCATGCAG CGCCCTGCGC CGAGGTGATG GCACGTTTTG CCGCGTTTAT CGGTAAACAT
CATCTGGTGG CCCATAATGC GGCTTTCGAT CAACGCTTTC TGGATGCCGA ATTTGCCCAG
ATAGGCCACC AATATCCCGG ACAATTTGGC TGCTCACTCC TACTGGCAAG GCGGTTATAC
CCAGAGGCTA TCAATCATCA GTTGGCAACC CTAGTGCGCC ATAAGCAGCT ACCAACCGAT
GGCACCTTTC ACCGTGCCTT GGCGGACGCG GAAATGACGG GGCATTTATG GCTGCGCATG
CTGGCCGATC TTAAACAAGG ATATGCGATT ACTGAGCCGC CCTTTAGCCT GATGCAAAAA
ATCATGACCA AGACTAAGGC CGAGGTGCCT AAGTTTTTGC GCCAGTACGC CAGAGGTTAG
|
|---|
| Protein sequence | MRNRAMPLLQ CRRLNVLRPL TLNSVEPMSR TPTYSPANTL VVLDFETSGL SPNQGARAIE
IGAVLIEQGQ ITARFSELMN PGFRINSFIE DYTGISNQML AHAAPCAEVM ARFAAFIGKH
HLVAHNAAFD QRFLDAEFAQ IGHQYPGQFG CSLLLARRLY PEAINHQLAT LVRHKQLPTD
GTFHRALADA EMTGHLWLRM LADLKQGYAI TEPPFSLMQK IMTKTKAEVP KFLRQYARG
|
|---|
| |