| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1838 |
|---|
| Symbol | |
|---|
| ID | 4257252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 2161979 |
|---|
| End bp | 2162980 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638122496 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_737887 |
|---|
| Protein GI | 114047337 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1054] Predicted sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.287908 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAACG TTGTTGTTTG TGCTTTATAT AAGTTTGTTT CATTACCGCA TTTTGAGTCG
CTGCGTGAGC CACTCCTGTC CATGATGGAA CAGGCCGAGA TTAAAGGCAC ATTGTTGCTG
GCAAGTGAGG GGATTAACGG CACTGTGGCC GGCACTCAAG CGGCTATCGA CGCACTGCTG
GCTTGGCTGA ATAACCAAAA TGGTCTTGAA AACATTGTTT ACAAGTTATC TTTTGACGAC
GAAATGCCTT TCTACCGCAC TAAGGTGAAG CTGAAAAAAG AAATCGTCAC CATGGGCGTC
GAGGGTATCG ATCCGCTTAA AGTGGTCGGC ACCTATGTAA AACCGCAGGA CTGGAACGCG
CTGATTTCCG ATCCTGAAGT CATCCTAGTG GATACCCGCA ACGACTATGA AGTGCAAATC
GGCACCTTTA AAAATGCCAT TAACCCAGTG ACCGAAACCT TCAGAGAATT CCCTGATTAT
GTGAAGCAGA ATCTCGATCC TGCCAAGCAT AAAAAAGTCG CGATGTTTTG TACTGGCGGT
ATTCGCTGCG AAAAATCGAC CGCTTATTTA AAAGAGCAAG GCTTTGAAGA AGTTTATCAC
CTCGAAGGTG GCATCCTTAA ATACCTCGAA GAGATAAAAC AGGAAGAAAG CCTGTGGGAA
GGCGAATGTT TCGTCTTCGA TAACCGCGTC GCCGTTGACC ATGATTTGAA GAAAGGCCAA
TACGATCAAT GTAATGCGTG TCGTATGCCG ATCACAGAAG CCGAAAAATT AAGTCTAGCC
TATGTGCAAG GGGTTAGCTG CCCGCATTGT ATTGATAAGA TTTCAGAGGA GCAGCGTAAG
CGCTTTGTTG AACGTGAGCG CCAAGTGAAC TTAGCGAAAT CTCGCAACGA AGCCCATATC
GGTAGCGATG TGAATCAAGT GATTGAAGCG CGCCGTCAAA AGAAAGAAGC GCTGCGCCAA
CAATCGGTCG AGAAGAATAA AGCCAAGCAA GCGAATGTTT AA
|
|---|
| Protein sequence | MSNVVVCALY KFVSLPHFES LREPLLSMME QAEIKGTLLL ASEGINGTVA GTQAAIDALL
AWLNNQNGLE NIVYKLSFDD EMPFYRTKVK LKKEIVTMGV EGIDPLKVVG TYVKPQDWNA
LISDPEVILV DTRNDYEVQI GTFKNAINPV TETFREFPDY VKQNLDPAKH KKVAMFCTGG
IRCEKSTAYL KEQGFEEVYH LEGGILKYLE EIKQEESLWE GECFVFDNRV AVDHDLKKGQ
YDQCNACRMP ITEAEKLSLA YVQGVSCPHC IDKISEEQRK RFVERERQVN LAKSRNEAHI
GSDVNQVIEA RRQKKEALRQ QSVEKNKAKQ ANV
|
|---|
| |