Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1832 |
Symbol | |
ID | 4255216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2154550 |
End bp | 2156424 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638122490 |
Product | alkaline phosphatase |
Protein accession | YP_737881 |
Protein GI | 114047331 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.348845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACAA AACGACTGCC GCTGGCCGGT GCGATACTGG CAAGTTTACT CCTTGGTGCC TGTAATGGTG ATGACGGTAC CAATGGTGAG CAGGGGGAGA ACGGCTTAAA TTCATTAGTT AATGTGACTG CACTTGCCAT AGGTGATGCA AATTGTCCCG CTGGTGGTCA ACGCATCGAT ACAGGGCTTG ATGCAAATCG TAATGGCCAG TTGGAAGAGA CTGAAATCGA TGCGGCGCAA ACCCAATTTA TTTGCCAACC CCAATCTGCG GGAGTGTCAG CGGAGCTGAT CGGCCGTCAT CAAACAGGCA CTTATGGCCT GAGCGCTGCT GAAATTGTTG AATATCACAG TGCTTCTCAG CGTATTTTTG TGGTTAATGC GAAAAGCGGT AAGGTTGACA TTATCGATGC TAACTCGCTC AGCAACGCGG CTAAGGCAAC TGCGCCATTA GCCTTGAATA ATCTTGATAA GCTAGCTGAG CTGGATGTCG CCAAAGATGT CGGCTTGAGT TTTATGGGCA GCGTTAACAG TGTCAGTATT TCTGGTAACT TGTTAGCGGC GGCCATTGAG CGCGGCGATG CAGCAGGCAA TAAGACTCAA GCCAATGGCT ATGTGGCTTT CTACCAACTC AATGGCAATG AGACACCGCA GTATCTCAGC GCGGTTGAAG TCGGTGCATT ACCGGATAAC GTCGTCTTTA GTCATGATGG CAAAACGGTA CTCGTTGCGA ATGAAGGCGA ACCAAATCAA GACTATAGTA TTGACCCTGA GGGCTGTGTG GCGATTATCG CTATAGCGGA TGGTAAACCC GCAGCAACGG CGACGCTAGT GACATTCACT GAGTTTAATC AGGGCAATGC TCGTTATAAT GAAATCACCA AGGACATTAA AATTAATGGC CCTATGGCCA CTGTCGCGCA GGACTTAGAG CCTGAGTATA TCAGTGTCAG CCCCGATAAC AGCCGTGCCT TTGTGAGCCT GCAGGAGAAC AATGCCATCG CGGTGATTGA TATCGCCAAT GCCAAAGTAG CGAAGATTTT ACCCTTAGGG CTGAAAGATT ATGGTCTTGA TGTGAATAAA ATTGATGCAA GTGACAAGGA CGATATGGTC AACCTTCAGG CCTATGCGGG TGTGTATGGC ATGTATCAAC CCGATACCGT AGCGAGTTAC CGTTGGAATA ATACTGACTT TATTGTCACC GCTAACGAAG GGGATTCTCG CGATTATGCT GGGTTTTCGG AGGAAGCCCG CGCCGGTGAC TTAACCTTAG ATCCTAATCA TCCACAATTT GCCGCCGCAA AAGATAAGAC CCAATTAGCC CGTTTGAAAG TGACTAAGAG TATGGGTGAT GACGATAACG ACGGCGATTA CGACAAAATC GTGAGTTTCG GCGCGCGCTC CTTCTCAATC TGGACGGCCG ATGGTCAACA GGTGTTTGAC AGTAGTAGCG ATTTTGAGCG GATCACCGCA GCCTTGTTAG GCAATAACTT CAACAATAAC AATGAAGAAA ACAAAGGCGA TAGCCGCAGT GACGATAAAG GGCCCGAGCC AGAAGCCTTA GCTCTAGGCA AAATTGGCCA AAAACTCTAT GCCTTTATCG GGCTTGAACG TACCTCTGGC TTTATGATTT ACGACGTGAC GAATCCCTTT GACGTGCATT TTGTGGATTA TGTGGTAAAC CGTGATTTTG AGGCGGATTT CAGCATAGAT ACAGATACAG GCGAAGTGAA AGGCGATGCC AGTTTAGCGG GAGATTTAGG GCCAGAAGGC ATGAAGTTTG TGAGTGCCCA GAAGAGTCCT AATGGTCAGC CTCTGTTGAT CATTGGTAAT GAAGTCAGTG GCACAACCAG CGTGTACCAG ATCAAGGTGC AATAG
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Protein sequence | MNTKRLPLAG AILASLLLGA CNGDDGTNGE QGENGLNSLV NVTALAIGDA NCPAGGQRID TGLDANRNGQ LEETEIDAAQ TQFICQPQSA GVSAELIGRH QTGTYGLSAA EIVEYHSASQ RIFVVNAKSG KVDIIDANSL SNAAKATAPL ALNNLDKLAE LDVAKDVGLS FMGSVNSVSI SGNLLAAAIE RGDAAGNKTQ ANGYVAFYQL NGNETPQYLS AVEVGALPDN VVFSHDGKTV LVANEGEPNQ DYSIDPEGCV AIIAIADGKP AATATLVTFT EFNQGNARYN EITKDIKING PMATVAQDLE PEYISVSPDN SRAFVSLQEN NAIAVIDIAN AKVAKILPLG LKDYGLDVNK IDASDKDDMV NLQAYAGVYG MYQPDTVASY RWNNTDFIVT ANEGDSRDYA GFSEEARAGD LTLDPNHPQF AAAKDKTQLA RLKVTKSMGD DDNDGDYDKI VSFGARSFSI WTADGQQVFD SSSDFERITA ALLGNNFNNN NEENKGDSRS DDKGPEPEAL ALGKIGQKLY AFIGLERTSG FMIYDVTNPF DVHFVDYVVN RDFEADFSID TDTGEVKGDA SLAGDLGPEG MKFVSAQKSP NGQPLLIIGN EVSGTTSVYQ IKVQ
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