Gene Shewmr7_1822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1822 
SymbolhscB 
ID4255206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2144147 
End bp2144671 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content49% 
IMG OID638122480 
Productco-chaperone HscB 
Protein accessionYP_737871 
Protein GI114047321 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1076] DnaJ-domain-containing proteins 1 
TIGRFAM ID[TIGR00714] Fe-S protein assembly co-chaperone HscB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0713219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTATT TCGAGCTGTT TAAGTTTTCC CCTGCCTTCG ATATTGACAC CGCTGTGCTT 
GCAGAACGCT ACCGCGAACT GCAACGGGCG GTGCATCCCG ATAAGTTTGC CAACGATACC
GAGCAACAAC GCTTATTGTC GGTGCAACGC ACTGCGCAAG TGAATGACGG TTATCAAACC
CTAAAAGATC CTATCCGCCG TGCCGAGCAT ATGCTGTCGC TACGTGGTAT CGATTTAAGC
CACGAAACCA CCACAGTGAA AGATACTGCA TTTTTAATGC AGCAGATGGA ATGGCGTGAG
GCGTTAGAAG ACATTCGCGA TAGCGCCGAT CCTCAAGAAT GCATTGATGA GTTATACGAC
TCTTTCGCGG CCTATCGGAC AAAGTTGACG AAATTGCTCA CCGCACAGCT AAGCAGTGAC
AGCGAAGAAG ACGCCTTGTT AGCGGCGGTT CAAGTACGCA AGCTTAAATT TATGGCAAAA
TTACACGATG AGCTGACGCG TATCGAAGAC GCGTTGCTCG ATTAA
 
Protein sequence
MNYFELFKFS PAFDIDTAVL AERYRELQRA VHPDKFANDT EQQRLLSVQR TAQVNDGYQT 
LKDPIRRAEH MLSLRGIDLS HETTTVKDTA FLMQQMEWRE ALEDIRDSAD PQECIDELYD
SFAAYRTKLT KLLTAQLSSD SEEDALLAAV QVRKLKFMAK LHDELTRIED ALLD