| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1820 |
|---|
| Symbol | |
|---|
| ID | 4255204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 2143410 |
|---|
| End bp | 2143793 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638122478 |
|---|
| Product | scaffold protein |
|---|
| Protein accession | YP_737869 |
|---|
| Protein GI | 114047319 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
|---|
| TIGRFAM ID | [TIGR01999] FeS cluster assembly scaffold IscU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00411311 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTACA GTGAAAAAGT GATAGATCAT TATGAGAACC CACGTAACGT TGGTTCTTTC
GACAAGAACG ATCCTTCGGT CGTGACCGGT ATGGTGGGAG CGCCTGCCTG TGGTGACGTG
ATGAAGTTAC AGCTGAAAAT CGGCGCTGAC GGCATCATCG AAGACGCTAA GTTCAAAACC
TACGGTTGTG GCAGCGCGAT TGCGTCTAGC TCACTGGTAA CCGAGTGGGT CAAAGGCAAG
ACTATCGAGC AAGCGGCGGC CATCAAAAAC ACCGATATCG CGGAAGAATT AGCCTTGCCA
CCAGTGAAAA TCCACTGTTC TATTTTGGCA GAAGATGCCA TTAAAGCGGC GATCGACGAG
TACAAATCGA AACAAGCTAA GTAA
|
|---|
| Protein sequence | MAYSEKVIDH YENPRNVGSF DKNDPSVVTG MVGAPACGDV MKLQLKIGAD GIIEDAKFKT
YGCGSAIASS SLVTEWVKGK TIEQAAAIKN TDIAEELALP PVKIHCSILA EDAIKAAIDE
YKSKQAK
|
|---|
| |