Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1819 |
Symbol | |
ID | 4255203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2142158 |
End bp | 2143372 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638122477 |
Product | cysteine desulfurase |
Protein accession | YP_737868 |
Protein GI | 114047318 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00929317 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTTC CTATCTATTT AGATTATGCC GCCACCACGC CAGTTGATCC GCGAGTCGCG GAAAAAATGT TCCAATACAT GACGATGGAT GGCATCTTCG GTAACCCAGC ATCACGTTCT CACCGTTATG GCTGGCAAGC GGAAGAAGCG GTGGATGTGG CGCGCAGCCA AGTTGCTGAT CTGATCAATG CCGATCACCG TGAAATCGTG TTTACCTCAG GTGCAACCGA ATCAAACAAT CTGGCGATCA AAGGCGTAGC GCATTTCTAC AATAAGAAAG GCAAGCACAT CATCACCAGC AAGACTGAAC ATAAAGCGGT ACTTGATACC TGCCGTCAGC TTGAACGTGA AGGCTTTGAA GTCACTTACT TAGAGCCTGA AGCCAACGGT ATCATTCCGA TGGAACGTTT AGAAGCCGCG ATGCGTGACG ACACTATTCT TGTCAGCATC ATGCACGTCA ACAACGAAAT AGGTGTGATC CACGATGTGG ATGCCATCGG CGAGTTATGC CGCTCAAAAG GCATTATTTT CCATATGGAT GCGGCACAAA GCGCGGGCAA ATTACCTATT GATGTACAAA CCACTAAGGT TGACCTGATC TCTATTTCTG GCCACAAAAT GTATGGTCCA AAAGGGATTG GTGCTCTGTA CGTTCGCCGT AAGCCACGTA TTCGCTTAGA AGCGCAAATG CACGGCGGTG GTCATGAGCG TGGTATGCGC AGTGGTACTC TGGCGACTCA CCAAATCGTT GGTTTAGGCG AAGCGGCTGC GATTGCCAAA GCTGAAATGG CAACCGACAA CGCCCGTATC GCTAAGCTGC GTGACAAGTT ATGGAATGGC ATCAAGCACA TCGAAGAGAC GTATGTAAAC GGCGACATGA CTCACCGTGT GAGTGGTAGC CTGAACGTCA GCTTCAACTA TGTTGAAGGT GAGTCGCTGA TGATGGCATT AAAAGATTTA GCGGTTTCAT CGGGTTCTGC CTGTACGTCA GCCAGTCTCG AGCCAAGCTA CGTGTTACGT GCGCTCGGTT TAAATGATGA AATGGCGCAT AGCTCAATTC GTTTCTCAAT CGGTCGTTTT ACCACCGAAG AAGAAATCGA CCACGCTATC GAAACTATTA CACAATCTAT TGATAAATTA AGAGAAATGT CTCCATTGTG GGAGATGTTC AAAGATGGCA TCGACCTGAA TCAGGTGCAG TGGGCACATC ATTAA
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Protein sequence | MKLPIYLDYA ATTPVDPRVA EKMFQYMTMD GIFGNPASRS HRYGWQAEEA VDVARSQVAD LINADHREIV FTSGATESNN LAIKGVAHFY NKKGKHIITS KTEHKAVLDT CRQLEREGFE VTYLEPEANG IIPMERLEAA MRDDTILVSI MHVNNEIGVI HDVDAIGELC RSKGIIFHMD AAQSAGKLPI DVQTTKVDLI SISGHKMYGP KGIGALYVRR KPRIRLEAQM HGGGHERGMR SGTLATHQIV GLGEAAAIAK AEMATDNARI AKLRDKLWNG IKHIEETYVN GDMTHRVSGS LNVSFNYVEG ESLMMALKDL AVSSGSACTS ASLEPSYVLR ALGLNDEMAH SSIRFSIGRF TTEEEIDHAI ETITQSIDKL REMSPLWEMF KDGIDLNQVQ WAHH
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