| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1814 |
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| Symbol | |
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| ID | 4258399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2137339 |
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| End bp | 2138589 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638122472 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_737863 |
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| Protein GI | 114047313 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.109352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGAC CATTAGCCCT CTCCATTGGT TGGCGTTTTT ATCGTGCGCG CCAATCCAAT
AGTTTTATTA GCTTTATCTC CTTTGCATCG ACCGCGGGCA TCGCGCTAGG GGTTGCGGTG
CTGATTGTGG TGCTCTCAGC CATGAATGGT TTCGAGCGTG AGTTAGAGCA GCGCTTGTTA
GGCGTGATCT CCCAAGCCGA TGTGGTTGGT GTGAATGAGC CGATTGCCGA CTGGCGTGCG
GTTGAGCAAA CCGCCATGCA GATTGAAGGC ATTACGGCGG CGGCACCTTT TATTCGGATG
CAAGGATTAG TGCAAAAGCC CGGTGGTTTT CAGGGGCTTG CCGTTGTGGG AATCGACCCT
GAGCAAGAGG CAAAAGTCTC GACTCTCTCG CAATTTATGT CGAAAGAGAC TTGGCAAGGC
TTGAGCGAGG ATGACAATCA CATCGTCCTC GGCGAGAGTC TGCTGAAAAA GTTAGGCCTC
GAAGTTGGCG ATACCCTCGC TCTGTATGTG CAAGATCTTG ATCCAGAACA TGCCGGCAGT
TTACGGGCGG CCAAGAGCCA TCGTTTTGTG GTGTCGGGTG TGTACCGTTT AGGCGGCGAG
CTTGAGTTAA CCACGGCGTA TATTCCGATG CGCTATGCGG CGAATATCCT AAATTTACAT
CAAGGTGTTA CTGGGGTGCG GATCAGTGTG GCGCAGGTGT TTGATGCGCC AGCGAAAATT
CGTGAGTTGG GTTATGCCTT AAACCAGTCC GTTTATATCA GTGATTGGAC GCGTACCCAA
GGGCATTTAT ATCAAGATAT TCAATTGGTT CGCACCATTA TGTATCTCGT TTTGGTGTTA
GTGATTGGCG TGGCCTGTTT CAATATTGTC TCAACGCTAG TCATGGCGGT GCGGGATAAA
GCCAGTGAAA TCGCTATTCT GATGACCATG GGGTTAAGCC GTTTCTCAGT GATGGGGATT
TTTATGGTGC AAGGCGCGTT AAATGGCCTT GTAGGTTGTG CCCTCGGCGG TGTGATAGGT
ATTGCGACCG CGGTGAATCT CAGTGGTATT GCCCGTGGTA TTGAGCAGCT GCTTGGTATT
CAACTCCTCT CTGCGGATGT GTATTTTGTG GATTTTTTGC CGTCAGAGCT ACATATGACG
GATGCTGGTT TAGTGATTGT CACGGCGTTT GTGATGAGTC TTATTGCAAC CCTGTATCCC
GCGTGGAAGG CGAGCCAGAT TGGCCCTGCG CAAGCATTGG CGGGTAGATA G
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| Protein sequence | MKGPLALSIG WRFYRARQSN SFISFISFAS TAGIALGVAV LIVVLSAMNG FERELEQRLL
GVISQADVVG VNEPIADWRA VEQTAMQIEG ITAAAPFIRM QGLVQKPGGF QGLAVVGIDP
EQEAKVSTLS QFMSKETWQG LSEDDNHIVL GESLLKKLGL EVGDTLALYV QDLDPEHAGS
LRAAKSHRFV VSGVYRLGGE LELTTAYIPM RYAANILNLH QGVTGVRISV AQVFDAPAKI
RELGYALNQS VYISDWTRTQ GHLYQDIQLV RTIMYLVLVL VIGVACFNIV STLVMAVRDK
ASEIAILMTM GLSRFSVMGI FMVQGALNGL VGCALGGVIG IATAVNLSGI ARGIEQLLGI
QLLSADVYFV DFLPSELHMT DAGLVIVTAF VMSLIATLYP AWKASQIGPA QALAGR
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