| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1796 |
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| Symbol | |
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| ID | 4258520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2117520 |
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| End bp | 2119019 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638122455 |
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| Product | phage integrase family protein |
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| Protein accession | YP_737846 |
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| Protein GI | 114047296 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.138776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACTT ATCTTCATAA AAATCGCAAC GGTAATTACT ACAGCCGCAT CCCTTTTCCT
GCCTGCTTAA AAGCCGTTGG TTTTCCCTCT GAAGTAAGGT TCTCTCTGAG AACGAAGGAT
AGAAACGAAG CTATGGTTTC AAACCTTGAA GTCGCCTTAA AAGCAAAGCT ATGGATTGAG
GAAATCAAAG TGGCAGAGAT GTCAGAAGGT TTGAAAAATA AGGTCATTCA GAAAAGAGCT
GAAATTCGTC TACAAGAACG AATGCAGGTT GAAATTGATA AGAAAAACAA ACAGTACATA
GAGCAGTTGA AGGCTTCTAT CCAGTTGAAA AATCAGTTGC AGGCCTCTGA AAACCGTAAT
CAAGAATTGG TAAATCAGAA TCAAGAGATA AAAGTCATTG CAAGAAAAAT ACACTCTGCC
GCAAAGGTAA AAGTAGAGAG TAACGAGTTA GCACATCAAA AAATCACCGA TTTTATTAGT
GAAAACATCG GTATAAATAA TGTTCGGTCA TCAAAAGTTA TTAGAACATT AGAGGAGTTA
CAAACCGAGT TTTTAGCGGA TAAAGTGAGA GACCAAATTG TTAATAAATC ATTGAATCAA
CTAAAGTTAA GAACGAGTGC TTTAGTTCAT TTTGCTGGTG GCTCGACAAG AATTACAGAT
CTTACATACG GAGATGCACG TAACTTTCAG GAGCATATCA CTGAGGGAAG AAGCGGAAAG
ACCGTTAGTG AGTATTTAAG CGCCTGTAGC CAGATGTTTA AGTATGCATG CAAATTAGAA
TACGTTGAGA AGAATCACTT TAGTGGCTTA AAAGTACCAA ATTCTGCGTC GGATAAACGT
CCACGATGGA CGAGTGAACA ATTACTGAAT TTGTTCAGTT GTGAGATTTT TACCGAACAC
ACGTTTAGAA ATATTGATGA TTACTGGCTT CCACTTGTCA TGTTACATAC CGGCGCTCGC
CCGTCTGAGA TCTGTCAGTT AGAAACTGCG GATTACAAGG TAATATTTGA CACCCCGAGT
TTGTCGATTA CTGATGATTC TGTGTATGAA GACAGTGAGA AACGCGTTAA AAATAAAAAT
GCTAAGCGTA TTGTTCCTAT CCATCACAAG CTCATTGAAT TAGGTTTCTT AAAGTTTATT
GAAACTAAAG TTAAGGCCGG AGACAGACAG TTATTTAGCT CAACTCCAAT AGGTGCAGAT
AAGGACTGGT CTAAAGGATT CACGCAGAGA TTTAGTCGAA CTTTAACGAA ACTCGGTCTA
GAAGCAGGGA AGCGGCCTAC TGCGTATGGA TTTAGGCATA CCGTGAGGGA TGAATTTAAA
CTCAGTGAGT CTCCTAAAGA CATTGTTACA GAGCTTATCG GACATGAAAA AGAAACCTTT
GGAGAGATTC ATTACACTCA CAGTGAGTTT GATATCGTTC GTAAATTAGA AGTCCTGCAT
CAAGGACTTA ATTTTGATAA AGAATTGATT AAGGTCGCCT CAGACCCGTT ATTTCGATAA
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| Protein sequence | MATYLHKNRN GNYYSRIPFP ACLKAVGFPS EVRFSLRTKD RNEAMVSNLE VALKAKLWIE
EIKVAEMSEG LKNKVIQKRA EIRLQERMQV EIDKKNKQYI EQLKASIQLK NQLQASENRN
QELVNQNQEI KVIARKIHSA AKVKVESNEL AHQKITDFIS ENIGINNVRS SKVIRTLEEL
QTEFLADKVR DQIVNKSLNQ LKLRTSALVH FAGGSTRITD LTYGDARNFQ EHITEGRSGK
TVSEYLSACS QMFKYACKLE YVEKNHFSGL KVPNSASDKR PRWTSEQLLN LFSCEIFTEH
TFRNIDDYWL PLVMLHTGAR PSEICQLETA DYKVIFDTPS LSITDDSVYE DSEKRVKNKN
AKRIVPIHHK LIELGFLKFI ETKVKAGDRQ LFSSTPIGAD KDWSKGFTQR FSRTLTKLGL
EAGKRPTAYG FRHTVRDEFK LSESPKDIVT ELIGHEKETF GEIHYTHSEF DIVRKLEVLH
QGLNFDKELI KVASDPLFR
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