Gene Shewmr7_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1788 
Symbol 
ID4258512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2111378 
End bp2112463 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content43% 
IMG OID638122447 
ProductATP-binding region, ATPase-like protein 
Protein accessionYP_737838 
Protein GI114047288 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0760005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGAAGG CAGTCTCAGA GTTATTAGAT GGGTCACCAG GCCTGAAAGG ACGTCAAATT 
GCCAAGGAGC TGGGGCTGGA TAAGTCCCAA GTGAACTCGT TTCTTCACAA AAACCAGGAT
ACGTTTGTGA AAAACTCAAA TCATGAATGG TGCTTGATTC GGGCTCAGCA TGTGGAAATT
GATTTCGGTA CAGGTTGGAT TGATGAGAAA GCCTTTGAAA GTGCTATCGG TAAGCTTGCG
TACCAAAAAG ATGCCACAAA GGTAACATTT AAATTCGGCA TCGATTGTAA GTTTTTGCTG
ATAGCATTGG CCCGTTTTCT TGCTCTGGCG AATCAGCTTA CTGCTAATGG GAAGGATGTG
GTGATGGATA CTACAGCATG TCCTAATACT CACAGTTTTT TCAGCAGAAA TGGCTTCTTT
GATTATCTTA ATCAAAGTGT CACTTGTCTT CCTGAAAGGC CCGTTTTGTC AGCTGCTAAA
ACTTATCGGG ATAATAGCGA TACCTTGGTC GAACTAGGAG AAATTGCACA GCCAACCCAA
AACAAGGAGC TTGTAATTCG TTTGGGCGAC AGGTTTGTAG AGCATTCTTC AGCTAGCTAT
TTCTTAGCGG CTAAGACTGT TTTTTCAGAG CTTGTAGGCA ACGTTACTGA TCACAGTGAA
TCCAAAATAC CTGGACTAGC AGGTCTGCAA GTATATCGAC CGTATAATAA ACCAAAGCAT
ATTCAAACAG TCATATCCGA CTCTGGTTTA GGTATTGCCG CTACCTTGAG AACAACGTTA
CAAAGTGAAC ATCCGAAGTT ATACGCACAG TTTTCAGCGG AAACTGCTGA GAATGATATT
GCGCTAGTTC AAAAAGCTTT TACATCTGGT GAGGTTAGTC GCTTTGGTAA AGGCCGGGGG
CTAGGCTTTA AGAGTAGTCG AGAGCACGCT AGTAAAGAGA AAGTTATCAT TGTTATTAGG
CAGCTAACTT TCTCATTGGC TTTGGAATAC TCGAAGGGAC AACTCATCAA TGTTTCTGAA
GATCGGGGGT TGGTCCCTAT CACAGGAACC CATATCTGTT TTGACTTCTA TGTTGACAAT
TTCTGA
 
Protein sequence
MLKAVSELLD GSPGLKGRQI AKELGLDKSQ VNSFLHKNQD TFVKNSNHEW CLIRAQHVEI 
DFGTGWIDEK AFESAIGKLA YQKDATKVTF KFGIDCKFLL IALARFLALA NQLTANGKDV
VMDTTACPNT HSFFSRNGFF DYLNQSVTCL PERPVLSAAK TYRDNSDTLV ELGEIAQPTQ
NKELVIRLGD RFVEHSSASY FLAAKTVFSE LVGNVTDHSE SKIPGLAGLQ VYRPYNKPKH
IQTVISDSGL GIAATLRTTL QSEHPKLYAQ FSAETAENDI ALVQKAFTSG EVSRFGKGRG
LGFKSSREHA SKEKVIIVIR QLTFSLALEY SKGQLINVSE DRGLVPITGT HICFDFYVDN
F