Gene Shewmr7_1785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1785 
Symbol 
ID4258509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2105012 
End bp2106388 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content42% 
IMG OID638122444 
Producthypothetical protein 
Protein accessionYP_737835 
Protein GI114047285 
COG category[S] Function unknown 
COG ID[COG1479] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.163327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTAA GTGTCGCAAC CTGCTCAGCG CAACAACTTT TTGAAGGCCA TAAAATACAG 
GGGAGTAATG GTAAGCAGAT TATTGGAACG TTAGTTATTC CTGAATACCA GCGGCCTTAT
TGTTGGCAAA GCCAGCAAAT TGATAGCTTG CTAGAAGATT TAGAAGCGCA TTTTCATAAA
CATAATGAAC TATCGTATTA TTTGGGTAGC CTTATTCTTC ACCACGATGG ACAACAGTTG
AAAATCATCG ATGGTCAACA GCGTATTACA ACATTAGCTT TATTCGGTTT CCTCTTACAA
CAGCACCAAA AACTTGATCT ACGTTTTGAA TCGCCCCTTA GCCAACAGCA AATTAAGGCA
AATCTTGATT GGATAGCAAA TCATAAGTCA AAGTGGGCGA AGCTTATCAA TTTTGAACGT
ATTCAGTTTT CATTGGTAGT CACTGAGTCA GAAGATGATG CGTACCGCTT TTTTGAAACG
CAAAACACTG GCGGTGTGAG ACTGGGTGGC CCAGATATTA TTAAAGCACA TCATTTAAGG
GCGGTTCCTA AGGTTCATCA ATCAAGATTT GCGCTCCAAT GGGAAGGCTT GGGTAAGTTA
AATAACACCG TAAAATTTCT TTTGAAAGGA CGATATTGGC AACAGCTTAA TATGCGAGAT
CTTGCACCAC ATCAGCAGAC AAAAGTGGTA AGGGATCAAA TTGTCTCCGA ACTAGGTGAA
CAAACTACAG ACGGTGACGA TATTGCTTAT GGTCAAGTAC TGCGGTTTAC CGGGATTGGT
GGAGATGTTG TCCAACAAGC CGCGCAACAG GGATACGAAG TCAGACAACC GCTTAATGCG
GGTATTAACA CTATTCGTTA CTTGGCGTAT TTTAAAAACT TATATCAGCA GTACTGGAAC
CATCCGACTT TACCGCATCT AGAAGGCTAC AACCGTTTTG TTTGCTGGCT TAAGGGGGTG
GAAGGATGTG GTTATCTACA AGGTTTATAT GAAGCATGTC TGATGATGTA CATCAGCCAG
TTTGGTGAAT ATCAGTTGGA GTTGGCGGCG AAAAAATTAT TCAGAGTCGT TTACTCCCGC
AGAGTGAGTA ATCAGAAAGC GGTGAGAGAA AATTCCATTT CAAGTTTTGT GAGGGACTAT
CCAGTTTTGG ATTGGATTGC TTTGAGCTAC ACACCTAAGC AGTGTTTTAC CTTTTTTGAT
GCGTTTGATT TGGTCGTCGA TCCTAGCAAT TTAGAATCAG ATACCAATAG CGTTAAGAAG
CGCTTTATTG CTGAAGTAAG TAAGCATTTT CAGCTGGATT TGTCGCCAGA ACAGTACGCG
GCTTCATTTG CTAACTTATT AACCTGCAAT ATCACCGAAA TGACGGAGGC AGCATGA
 
Protein sequence
MTVSVATCSA QQLFEGHKIQ GSNGKQIIGT LVIPEYQRPY CWQSQQIDSL LEDLEAHFHK 
HNELSYYLGS LILHHDGQQL KIIDGQQRIT TLALFGFLLQ QHQKLDLRFE SPLSQQQIKA
NLDWIANHKS KWAKLINFER IQFSLVVTES EDDAYRFFET QNTGGVRLGG PDIIKAHHLR
AVPKVHQSRF ALQWEGLGKL NNTVKFLLKG RYWQQLNMRD LAPHQQTKVV RDQIVSELGE
QTTDGDDIAY GQVLRFTGIG GDVVQQAAQQ GYEVRQPLNA GINTIRYLAY FKNLYQQYWN
HPTLPHLEGY NRFVCWLKGV EGCGYLQGLY EACLMMYISQ FGEYQLELAA KKLFRVVYSR
RVSNQKAVRE NSISSFVRDY PVLDWIALSY TPKQCFTFFD AFDLVVDPSN LESDTNSVKK
RFIAEVSKHF QLDLSPEQYA ASFANLLTCN ITEMTEAA