Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1785 |
Symbol | |
ID | 4258509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2105012 |
End bp | 2106388 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638122444 |
Product | hypothetical protein |
Protein accession | YP_737835 |
Protein GI | 114047285 |
COG category | [S] Function unknown |
COG ID | [COG1479] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.163327 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGTAA GTGTCGCAAC CTGCTCAGCG CAACAACTTT TTGAAGGCCA TAAAATACAG GGGAGTAATG GTAAGCAGAT TATTGGAACG TTAGTTATTC CTGAATACCA GCGGCCTTAT TGTTGGCAAA GCCAGCAAAT TGATAGCTTG CTAGAAGATT TAGAAGCGCA TTTTCATAAA CATAATGAAC TATCGTATTA TTTGGGTAGC CTTATTCTTC ACCACGATGG ACAACAGTTG AAAATCATCG ATGGTCAACA GCGTATTACA ACATTAGCTT TATTCGGTTT CCTCTTACAA CAGCACCAAA AACTTGATCT ACGTTTTGAA TCGCCCCTTA GCCAACAGCA AATTAAGGCA AATCTTGATT GGATAGCAAA TCATAAGTCA AAGTGGGCGA AGCTTATCAA TTTTGAACGT ATTCAGTTTT CATTGGTAGT CACTGAGTCA GAAGATGATG CGTACCGCTT TTTTGAAACG CAAAACACTG GCGGTGTGAG ACTGGGTGGC CCAGATATTA TTAAAGCACA TCATTTAAGG GCGGTTCCTA AGGTTCATCA ATCAAGATTT GCGCTCCAAT GGGAAGGCTT GGGTAAGTTA AATAACACCG TAAAATTTCT TTTGAAAGGA CGATATTGGC AACAGCTTAA TATGCGAGAT CTTGCACCAC ATCAGCAGAC AAAAGTGGTA AGGGATCAAA TTGTCTCCGA ACTAGGTGAA CAAACTACAG ACGGTGACGA TATTGCTTAT GGTCAAGTAC TGCGGTTTAC CGGGATTGGT GGAGATGTTG TCCAACAAGC CGCGCAACAG GGATACGAAG TCAGACAACC GCTTAATGCG GGTATTAACA CTATTCGTTA CTTGGCGTAT TTTAAAAACT TATATCAGCA GTACTGGAAC CATCCGACTT TACCGCATCT AGAAGGCTAC AACCGTTTTG TTTGCTGGCT TAAGGGGGTG GAAGGATGTG GTTATCTACA AGGTTTATAT GAAGCATGTC TGATGATGTA CATCAGCCAG TTTGGTGAAT ATCAGTTGGA GTTGGCGGCG AAAAAATTAT TCAGAGTCGT TTACTCCCGC AGAGTGAGTA ATCAGAAAGC GGTGAGAGAA AATTCCATTT CAAGTTTTGT GAGGGACTAT CCAGTTTTGG ATTGGATTGC TTTGAGCTAC ACACCTAAGC AGTGTTTTAC CTTTTTTGAT GCGTTTGATT TGGTCGTCGA TCCTAGCAAT TTAGAATCAG ATACCAATAG CGTTAAGAAG CGCTTTATTG CTGAAGTAAG TAAGCATTTT CAGCTGGATT TGTCGCCAGA ACAGTACGCG GCTTCATTTG CTAACTTATT AACCTGCAAT ATCACCGAAA TGACGGAGGC AGCATGA
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Protein sequence | MTVSVATCSA QQLFEGHKIQ GSNGKQIIGT LVIPEYQRPY CWQSQQIDSL LEDLEAHFHK HNELSYYLGS LILHHDGQQL KIIDGQQRIT TLALFGFLLQ QHQKLDLRFE SPLSQQQIKA NLDWIANHKS KWAKLINFER IQFSLVVTES EDDAYRFFET QNTGGVRLGG PDIIKAHHLR AVPKVHQSRF ALQWEGLGKL NNTVKFLLKG RYWQQLNMRD LAPHQQTKVV RDQIVSELGE QTTDGDDIAY GQVLRFTGIG GDVVQQAAQQ GYEVRQPLNA GINTIRYLAY FKNLYQQYWN HPTLPHLEGY NRFVCWLKGV EGCGYLQGLY EACLMMYISQ FGEYQLELAA KKLFRVVYSR RVSNQKAVRE NSISSFVRDY PVLDWIALSY TPKQCFTFFD AFDLVVDPSN LESDTNSVKK RFIAEVSKHF QLDLSPEQYA ASFANLLTCN ITEMTEAA
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