| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1761 |
|---|
| Symbol | |
|---|
| ID | 4256288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 2081154 |
|---|
| End bp | 2082389 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638122420 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_737811 |
|---|
| Protein GI | 114047261 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0582] Integrase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0148676 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.285781 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAGGA GTACAAATAA GCTGACTGCA AAAGCGGTGC TCAATGCTAA AGCGGAAGCA
AAGCCCTATA GATTGTCAGA TGGTGGCAAT CTCTATCTCT ATGTGCGCAC TGCAGGGAAA
ACGTGGGAAT TTAGATACAT ACGTCCCTCC ACCAGCAAAC CCACCTATTT TGGTTTAGGC
TCATATCCTG ACGTATCCTT AGCTGAGGCG CGAGATAAAG CGCTAGAAGC GCGAAAAAAC
TTGGCCGAAG GCATCGACCC TCAATTACTT AAAGTTGAAA ACAAATTAAA AGCGGCAACA
GAGAACGCTC AAACTCTCAA GCATATTGCG CAAATGTGGA TGGACTCTAA GCAGGGAAGC
ATTAAGCCTA AAACCATCGA AGGCAATTGG CGTAAGCTTG AGCTGTATGC CTTCCCTAAA
CTGGGGAGTA TTGCGATTAG CAGACTCACG GCTCCCATAG CCATTGCCGC GCTAAAGCCC
CTAGAGCAAA AGGGGCATCT TGAAACGGTT AAGCGTACCG CTCAGTTGCT GAATGAAATC
ATGAACTATT CGGTTAACTC TGGTTACATT CATGCCAATC CGTTGTCAGG TATTCGAGAA
GTTTTTAGAA AAAGCAAAGT GGAGCATCTG AAGGCATTAA AACCAGCAGA GCTAGCTGAA
TTACTGCAGA CCGTCGCAAA CGCCAATTTA TTGCTAACGA CCAGGTGTTT GATTGAATGG
CAATTGCACA CAATGACCAG GCCAAATGAA GCGGCCGGAG CCCGTTGGGA AGAAATCGAT
TTTGATGCCA AACTTTGGAC TATTCCTGAA TCGCGCATGA AAATGAATCG TGAGCATATT
ATCCCGCTTA CAGAGCATAC CCTCGCGATA CTGGAAACTG TTAAGCCGAT TGGTGAACAC
AGCCAATTCG TTTTTCCGTC TTCTAAAGAT CCCAAAAAGC ACACAGATCC AGAAACCATC
AACAAAGCAT TAGGGCGCAT GGGATTAAAG GGAAGAACAA CGGGTCATGG TTTACGCTCG
CTGGCGAGCA CTACCTTAAA CGAACAAGGC TTTGATGGTG ATGTTATTGA GGCTGCGTTA
GCCCATGTTG ATAAAAACCA AATCCGCAGT GCCTATGATC GCACTACCTA TTTAGAGCGA
CGGACCAAGT TAATGGAGTG GTGGAGCAAT CATATTGCCA CTGCAGCAGT TGGCTCTTTG
TCAGTAACAG CGGGTTCAAG AAAATTAGGG GCATGA
|
|---|
| Protein sequence | MGRSTNKLTA KAVLNAKAEA KPYRLSDGGN LYLYVRTAGK TWEFRYIRPS TSKPTYFGLG
SYPDVSLAEA RDKALEARKN LAEGIDPQLL KVENKLKAAT ENAQTLKHIA QMWMDSKQGS
IKPKTIEGNW RKLELYAFPK LGSIAISRLT APIAIAALKP LEQKGHLETV KRTAQLLNEI
MNYSVNSGYI HANPLSGIRE VFRKSKVEHL KALKPAELAE LLQTVANANL LLTTRCLIEW
QLHTMTRPNE AAGARWEEID FDAKLWTIPE SRMKMNREHI IPLTEHTLAI LETVKPIGEH
SQFVFPSSKD PKKHTDPETI NKALGRMGLK GRTTGHGLRS LASTTLNEQG FDGDVIEAAL
AHVDKNQIRS AYDRTTYLER RTKLMEWWSN HIATAAVGSL SVTAGSRKLG A
|
|---|
| |