| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1755 |
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| Symbol | |
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| ID | 4256282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2067539 |
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| End bp | 2072383 |
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| Gene Length | 4845 bp |
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| Protein Length | 1614 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638122413 |
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| Product | glutamate dehydrogenase (NAD) |
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| Protein accession | YP_737805 |
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| Protein GI | 114047255 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.240941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTGA AAGATGCAAT GCCTTCAGTA CTACTTGAAA ATGTAGTCAG TTTAATTCAC
GCTAAAGTCC CTAATTCACA AGCCAAGCAA GTTGAACAGT TCGCGACCTG CCTTTATGCC
CACATGTCGA AAGACGACCT CAATGCGCGT AACGACAGCG ACCTGTATGG TGCGGTTCTC
AGTTTATGGA ATGCACTAAA CAAAACCCCG AAAGGGGAGA CTCACCTCAG AGTATTCAAT
CCAAGTCAGT CTAAACACGG CTGGCAATCT ACCCATTCCA TTATCGAAGT TATCCAGCCT
GACATGCCAT TCCTGGTAGA TTCAGTTGGT ATGGCATTGA ATCGTATGGG TATTACGGCT
CACATGATGT TACACACTCC GCTGGCGATT GAGCGTTCAG CCCAGGACGT AACCAAAGTC
ACTTATCTGA ATCAAAGCCC TGAAAGCACT GAACACGTTG CCGTTTTCCT GATTGAAATC
GACCGTCAAA GCAGCAGTGT AGATATCAAA GCCCTTGAGC GCGAAATCCA ATCTGTGCTG
GGTGATGTGG CCGCGTCAGT CAACGACTGG AGCGCGATGT CAGCTAAGCT GAGTGAGACC
ATTAAAGAAT TACCTAAGCG TCCATTCCCC GGTGAGAAGC AAGAGTTAGA AGAAGCGATT
AACTTCCTAA CTTATCTTAA TAATCATCAC TTTACCTTAC TGGGCTACCG CCAATACGAT
TTAAAACGTG TTGAAGGCGA TGTTGAGCTA GTGCCGAATA TGGCCTCTAG CTTAGGCTTA
ATGAACAAGC ACCATAAGAC TCAGCCAGAG CAAGGTTTGT TATTATCAAG CTTCTCTGAC
AGTGCCCGTA AAGAAGCCTT AGACGACAGC CTACTGATCC TAACTAAGAG CAGCGCCAAG
AGCCGTGTGC ATCGTCCAGC CTATGTTGAC TATATTGGTA TCAAACGCTT CGACAAGAAA
GGCAACGTGG TCGGAGAAGA TAGATTTATC GGTTTGTACG CTTCAAATGT GTATAACCGC
AGCCCACGTG AAATTCCGCT GCTGAACGAA AAAGTCCAGC GCGTATTAGA CCGTTCAGGT
TTAACCCCAC GTTCTCACGA CTATAAAGCC TTGCTGAACA TTCTCGAAAA CCTACCGCGT
GATGAGCTAA TCCAAGCCAA TGTGGATGAT TTAGCACACA CGGCGCACGG TGTGCTCGAG
ATGCAAGACA GGGACAAACT GAAACTCTTT GTTCGCAAAG ATGGTTTCGG TCGTTTCTTA
TCCTGTTTAG TGTACGTTTC AAAAGATCGT TACAACACTA AACTTCGCCA AGATACCCAG
CGTATTCTGG CTCAGCATTT CAACAGTAAA GAAGATGTAG AGTTTACGAC ATATTTCTCC
GAGTCAACCC TGGCCCGTAC TCACTACATT GTCAAAGTTG ATAACAATAA TATGGATGTA
GATGTGGCTG CCATAGAGAA TAACTTAATT GAAGCGGCAC GTTCTTGGGA AGATAAGTTA
AGCACCGCGC TAAACAATGC CTTAGGCGAA GAAGCCGGTA CTCATCTGAT GAAGCGTTAC
GCTAACGCCT TCGAACAGAG CTATAAAGAA GACGTATTAC CAAGTTCAGC GGTTGTTGAT
ATGCAACAGC TCGAAGCCTT GGATGACGAT CACAAGTTAG GCATGTTGTT CTATCAACCG
CAGGAAGCTG CGTTGAACGA CAACAAAGTG CGTTTAAAAC TGTTCCATAA AGATGAGCCA
ATCCATCTTT CTGACGTACT GCCGATGTTG GAAAACTTTG GTCTGCGCGT GATCAACGAG
CGCCCCTATG AAGTGACGAC CTCAGACGGT TCTACCTTCT GGATCCTAGA CTTCTTAATG
ACGGTTAAAG TCACTAATAC CGACAATATC GCCGATAGCC AAGACAGATT CCAAACTGCA
CTTTCTCAAG TGTGGCAAAA GAAATTAGAA GATGACGGGT TTAACCGCAT CATTCTGGCG
TCAGGTTTAA CTGGCCGTGA AGTGTCAGTA CTGCGTGCTT ACGCTAAGTA CATGCGTCAA
ATCGATGCGA CATTCAGCCA AGCTTACATC GAAGAAACCT TCGGCCGTTA CCCACAAATC
GCTGATTTGT TGGTGAAAAT GTTTATCCGT AAGTTCAATC CAAAACTGAA GACCCGTACT
CTGGGCAAGT TTATGGAGCA GATCAACCTA CGTTTAGACG AAGTATCGAG CCTAGATGAT
GACCGTATTA TCCGTCGTTA CCTCGATCTG ATTAACGCCA CGTTGCGTAC TAACTTCTAC
CAACTGGATG CCAAAGGCGA ATCTAAGAGT TATATCTCGT TTAAATTCAT GCCTTCGTTA
ATTCCTGAAA TGCCGCGTCC GCTGCCGAAA TTCGAAATTT TCGTTTATTC GCCACGGGTT
GAAGGTGTGC ATTTACGCTA CGGTAAAGTG GCTCGTGGTG GTCTGCGTTG GTCTGACCGT
CGTGAAGACT TCCGTACCGA AGTGCTTGGC TTAGTAAAAG CACAACAAGT GAAGAACACC
GTAATCGTGC CTGTGGGCGC GAAAGGTGGT TTCGTTTGTA AACAACTGCC TACTGAAGGT
GGCCGCGAAG CCTTCTTCAC CGAAGGTCAA GAATGTTACC GCATCTTTAT CCGTGCGCTG
CTCGATATCA CAGATAACAT CGTTAACGGT GAAATCGTTC ACCCGGTAGA TGTGGTCCGT
CACGATGAAG ATGATCCATA TTTAGTGGTC GCGGCAGACA AAGGGACTGC CACCTTCTCT
GACATTGCTA ACGCCATTTC TCAAGAATAT AACTTCTGGT TAGGCGATGC GTTCGCATCG
GGTGGTAGTA ACGGTTACGA CCATAAGAAA ATGGGTATCA CGGCCAGAGG TGGTTGGGAA
TCGGTTAAAC GCCACTTCCG CGAAGTGGGT ATCGATTGTC AGACCACAGA CTTTACCTGT
TTAGGTATTG GTGACATGGC GGGTGACGTA TTCGGTAACG GTATGTTGTT GTCTAAGCAC
ACAAAACTTG TAGCTGCATT CAACCATATG CATATCTTTA TCGACCCAAA TCCAGATACT
GCTGCCAGCT ATGAAGAACG TGCCCGTTTA TTCGCGCTGC CACGTTCAAC CTGGGAAGAC
TACAACAGCA AGCTGATTTC TAAGGGCGGC GGTATCTTCC TGCGCTCATC TAAGTCGATT
CCATTATCTG CTGAAATGAA GCAAATGCTG GAAACGGAAA AGACGTCGAT GACACCGACT
GAGCTGATGA AAGAACTGCT GAAAATGCCA GTAGATCTGA TTTGGAACGG TGGTATTGGT
ACTTACGTTA AGTCATCACG CGAAACCCAT GCAGAAGTGG GCGACCGCGC TAACGATGCA
CTGCGTGTCA ATGGTCGCGA ACTGCGCGCC AAGATCGTGG GTGAGGGTGG TAACTTAGGT
TGTACTCAGT TAGGTCGTAT CGAATATGCG GCCAATGGCG GCCGTATCAA CACTGACTTC
GTGGATAACG TGGGTGGTGT AGACTGTTCT GACAACGAAG TGAACATCAA AATTCTATTA
AACGCGTTAG TGGCTGAGGG TGAACTGACA CTCAAGCAAC GTAACCGTTT ACTGGAAGAG
ATGACTGAAG AAGTCGGCCA AATCGTACTG CAGGATTGTA AAGATCAAAC CCGTACTATT
TCGGTCACCC AAGTCCGCGG TGCTGAGCAG TTAAAAGAGC AAATTCGCTT TATCCAGTAT
CTGGAAAAAG AAGGCAAGTT AGACCGCGCC TTAGAATTCT TACCTTCGGA AGAAGAGCTG
GCAGAACGTT TAGCTAATGG CCGCGCCTTA ACGCGTCCTG AGCTATCGGT ACTGGTGGCG
TACGCTAAGA TGGTACTGAA AGAGCAGTTA CTGACTCAAG AAATCACCGA AGACACACTG
CTGAGCCAAC TGCTAATTGC ATACTTCCCG AAAAAACTTC AGGAACTGTA CAGTCACAGA
ATGGTGACGC ATCCACTGCG CGGTGAAATC ATTGCAACGT CACTGGCCAA CGAGTTGGTC
AATGATATGG GTCTGAACTT TGTTCAACGT ATGCAAGATG AGACTGGTGC CTCAGTTGCC
GACGCAGCAA TTTGTTACAC TATGGCTCGC GAAGTGTTTG GTTTAGCTGA ATTAACTAAA
GCGATCACTG ACTTAAACGG TATTGTACCT GCTGTGGTTC AGGGCGAAAT GCTGCATCAG
TTACGTCGCA ATATGCGCCG TGCCTGCCGC TGGTTCCTGC GTCACCGCAA CCGTACTTGG
AGCATCGAGC AAACTGTTGC CTTCTTCAAA CCTGTATTTG AACAAATCAA AGCCAATGTT
CATTCCTACT TGGTAGAAGA AGAAGCGGCG GGTATCCAAG CTGAGATCAA CGCTCTTGTT
AAAGAGAATG TTCCTCAGGA TGTGGCGACC GTCGTTGCAA ACATGAGCAC ACTGTTCTCG
GCTCTGGATA TCGCGCAAAT TGCGCAAGCC GAAGAGAAAA CAGTCGAGCT TGTTGCCGAG
ACATATTTCA AACTCGGTGC TCGCGTTGAG CTGCACTGGT TCCTAGAGCA GATCAGTGCA
CAGCCTGTGG CAAACCATTG GCAAGCACTG GCTCGTGCAG CCTTTAGGGA AGAGTTGGAT
TGGCAACAAC GTGCGTTGAC GTCAGTGGTC TTAAGAACCT GTAGTGCAAC CTGTGACGCC
CAGAGCGTTA TTTCTCAGTG GATTGATACC AATCAAGCCT TACTGGAAAG ATGGTTCCAT
ATGCTGGCTG ATTTCAAAAC GTCGCAAAGC CATGAGTTTG CTAAGTTCTC TGTCGCCCTA
CGTGAACTTA ACCTTCTGAT CCTTCATTGC GAAGGCCAAA AGTAA
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| Protein sequence | MALKDAMPSV LLENVVSLIH AKVPNSQAKQ VEQFATCLYA HMSKDDLNAR NDSDLYGAVL
SLWNALNKTP KGETHLRVFN PSQSKHGWQS THSIIEVIQP DMPFLVDSVG MALNRMGITA
HMMLHTPLAI ERSAQDVTKV TYLNQSPEST EHVAVFLIEI DRQSSSVDIK ALEREIQSVL
GDVAASVNDW SAMSAKLSET IKELPKRPFP GEKQELEEAI NFLTYLNNHH FTLLGYRQYD
LKRVEGDVEL VPNMASSLGL MNKHHKTQPE QGLLLSSFSD SARKEALDDS LLILTKSSAK
SRVHRPAYVD YIGIKRFDKK GNVVGEDRFI GLYASNVYNR SPREIPLLNE KVQRVLDRSG
LTPRSHDYKA LLNILENLPR DELIQANVDD LAHTAHGVLE MQDRDKLKLF VRKDGFGRFL
SCLVYVSKDR YNTKLRQDTQ RILAQHFNSK EDVEFTTYFS ESTLARTHYI VKVDNNNMDV
DVAAIENNLI EAARSWEDKL STALNNALGE EAGTHLMKRY ANAFEQSYKE DVLPSSAVVD
MQQLEALDDD HKLGMLFYQP QEAALNDNKV RLKLFHKDEP IHLSDVLPML ENFGLRVINE
RPYEVTTSDG STFWILDFLM TVKVTNTDNI ADSQDRFQTA LSQVWQKKLE DDGFNRIILA
SGLTGREVSV LRAYAKYMRQ IDATFSQAYI EETFGRYPQI ADLLVKMFIR KFNPKLKTRT
LGKFMEQINL RLDEVSSLDD DRIIRRYLDL INATLRTNFY QLDAKGESKS YISFKFMPSL
IPEMPRPLPK FEIFVYSPRV EGVHLRYGKV ARGGLRWSDR REDFRTEVLG LVKAQQVKNT
VIVPVGAKGG FVCKQLPTEG GREAFFTEGQ ECYRIFIRAL LDITDNIVNG EIVHPVDVVR
HDEDDPYLVV AADKGTATFS DIANAISQEY NFWLGDAFAS GGSNGYDHKK MGITARGGWE
SVKRHFREVG IDCQTTDFTC LGIGDMAGDV FGNGMLLSKH TKLVAAFNHM HIFIDPNPDT
AASYEERARL FALPRSTWED YNSKLISKGG GIFLRSSKSI PLSAEMKQML ETEKTSMTPT
ELMKELLKMP VDLIWNGGIG TYVKSSRETH AEVGDRANDA LRVNGRELRA KIVGEGGNLG
CTQLGRIEYA ANGGRINTDF VDNVGGVDCS DNEVNIKILL NALVAEGELT LKQRNRLLEE
MTEEVGQIVL QDCKDQTRTI SVTQVRGAEQ LKEQIRFIQY LEKEGKLDRA LEFLPSEEEL
AERLANGRAL TRPELSVLVA YAKMVLKEQL LTQEITEDTL LSQLLIAYFP KKLQELYSHR
MVTHPLRGEI IATSLANELV NDMGLNFVQR MQDETGASVA DAAICYTMAR EVFGLAELTK
AITDLNGIVP AVVQGEMLHQ LRRNMRRACR WFLRHRNRTW SIEQTVAFFK PVFEQIKANV
HSYLVEEEAA GIQAEINALV KENVPQDVAT VVANMSTLFS ALDIAQIAQA EEKTVELVAE
TYFKLGARVE LHWFLEQISA QPVANHWQAL ARAAFREELD WQQRALTSVV LRTCSATCDA
QSVISQWIDT NQALLERWFH MLADFKTSQS HEFAKFSVAL RELNLLILHC EGQK
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