Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1746 |
Symbol | |
ID | 4256273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2053488 |
End bp | 2053946 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638122404 |
Product | putative GAF sensor protein |
Protein accession | YP_737796 |
Protein GI | 114047246 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1956] GAF domain-containing protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.698368 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCGC AATTTTATGA GTCACTGAAT CGTCAAGCAC TGGCCTTACT CGAGGGCGAG GATGATTTAG TGGCTGCCAT GGCTAACTTT TCTGCTTTGC TAAACGATAA CCTAACCGAA CTGAACTGGG TGGGTTTTTA CGTGATGCGT GGCGAACAGC TGGTGTTAGG TCCTTTCCAA GGTAAAGTGG CCTGTACCCG TATTCCAATG GGTAAGGGCG TGTGCGGTAC CGCCGCGCAA ACCAATCAGA CGCAGCGCGT CGCCGATGTG CATCAATTTG ATGGTCATAT CGCCTGCGAT TCGGCCAGTA ATTCTGAAAT TGTTATCCCA GTCCGCGCCG ATGGTAAGGT TGTGGCCGTG CTGGATATCG ATAGTCCTAT TTTTGACCGC TTCGATGAAG AAGACCAAAA GGGCTTGGAA TTATTGGTAA AAAGCTTCGA AAACTGCCTA TTTGCTTAA
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Protein sequence | MKPQFYESLN RQALALLEGE DDLVAAMANF SALLNDNLTE LNWVGFYVMR GEQLVLGPFQ GKVACTRIPM GKGVCGTAAQ TNQTQRVADV HQFDGHIACD SASNSEIVIP VRADGKVVAV LDIDSPIFDR FDEEDQKGLE LLVKSFENCL FA
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