Gene Shewmr7_1741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1741 
Symbol 
ID4257698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2047339 
End bp2048565 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content52% 
IMG OID638122399 
Productnucleoside recognition domain-containing protein 
Protein accessionYP_737791 
Protein GI114047241 
COG category[R] General function prediction only 
COG ID[COG2715] Uncharacterized membrane protein, required for spore maturation in B.subtilis. 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.618339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTAAATC GGGTGTGGTT AGTGTTTTTC CTCACATCGC TGCTGGCGAT GGCGGTACAG 
CTTTTTAATG GGCATATCGA GGTGCTTGCC AACGCAGTAG AGGCCTTGTT TGCCAGCGCT
AAATTGGCCG CTGAAATCGC CCTAGGCTTA GTGGGCGTTT TGTCCCTGTG GATGGGATTA
ATGCGAATTG GTGAAAAGGC AGGCGTTGTT GGGGCGATTG CCTTTGTGTC TGAGCCGCTG
CTGCGCCGCT TAATGCCCGA AGTGCCCAAG GGACACCCCG CATTTGGCAG TATGACAATG
AACTTAACGG CCAACGTGTT TGGGCTAGAT AATGCTGCAA CGCCATTGGG GCTTAAGGCA
ATGCAGGATT TGCAGAGTCT TAATCCGGTC AAAACCGTCG CAACCAATGC ACAAATTCTA
TTTTTAGTGC TCAATACCTC CTCGGTGACC TTAGTTCCTG TCACTGTGTT TTTGTACCGT
GCCCAGCAGG GCGCCGCCGC ACCTGCGGAC ATATTTTTAC CGATTCTGCT CGCCACGTCT
GCCTCAACCT TAGCGGGGCT TTTGATCGTC GCTGTTGTGC AGCGGCTTTC ACTGTTCAAT
GCCGTGGTGC TCGGATATGG CGCAGTGCTG CTGTCGGCAT TAGTTGCCAG TGGTTTTTAT
TTGATGACCT TAACGGCAGA TGCGATTGGC ACAGTGTCGA CCGCCTTAGG CAACGGGGTA
TTGCTACTGT TAGTCTTCAG TTTTGTGCTG GTGGCTGGCG TGAGAAAAGT GGCGATTTAT
GATGAGTTTA TCGAAGGCGC CAAGGCGGGG TTTAACCAAT CGATTCAACT GATCCCGTAT
CTTCTAGCCA TGCTGCTGGC GATTGGTTTA CTCAGAGCGT CGGGCGCGTT AGATTACCTG
CTGCAACTAA TTGCCAGTGG CGTGAGTCTT TTCGGGTTTG ATACTCGTTT TGTCGATGCA
ATGCCAACCG CATTAATGAA GCCTTTTAGC GGTTCGGGCG CGCGGGCTAT GATGCTCGAA
ACCATGGCGC ACCATGGGGT GGACTCCTTT GCGGGGCGCT TGGCAGCGAT TTTCCAAGGG
AGCACTGAAA CAACTTTTTA TGTGCTGGCC GTTTACTTTG GCTCTGTTGG GATCCGTCAC
GGGCGTCATG CGCTCGCCTG TGGTTTAACG GCCGATTTTG CAGGGATCTG CGCCGCAATT
GCGGTCTGTT ATTGGTTCTA TGGCTAA
 
Protein sequence
MLNRVWLVFF LTSLLAMAVQ LFNGHIEVLA NAVEALFASA KLAAEIALGL VGVLSLWMGL 
MRIGEKAGVV GAIAFVSEPL LRRLMPEVPK GHPAFGSMTM NLTANVFGLD NAATPLGLKA
MQDLQSLNPV KTVATNAQIL FLVLNTSSVT LVPVTVFLYR AQQGAAAPAD IFLPILLATS
ASTLAGLLIV AVVQRLSLFN AVVLGYGAVL LSALVASGFY LMTLTADAIG TVSTALGNGV
LLLLVFSFVL VAGVRKVAIY DEFIEGAKAG FNQSIQLIPY LLAMLLAIGL LRASGALDYL
LQLIASGVSL FGFDTRFVDA MPTALMKPFS GSGARAMMLE TMAHHGVDSF AGRLAAIFQG
STETTFYVLA VYFGSVGIRH GRHALACGLT ADFAGICAAI AVCYWFYG