Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1741 |
Symbol | |
ID | 4257698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2047339 |
End bp | 2048565 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638122399 |
Product | nucleoside recognition domain-containing protein |
Protein accession | YP_737791 |
Protein GI | 114047241 |
COG category | [R] General function prediction only |
COG ID | [COG2715] Uncharacterized membrane protein, required for spore maturation in B.subtilis. |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.618339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTAAATC GGGTGTGGTT AGTGTTTTTC CTCACATCGC TGCTGGCGAT GGCGGTACAG CTTTTTAATG GGCATATCGA GGTGCTTGCC AACGCAGTAG AGGCCTTGTT TGCCAGCGCT AAATTGGCCG CTGAAATCGC CCTAGGCTTA GTGGGCGTTT TGTCCCTGTG GATGGGATTA ATGCGAATTG GTGAAAAGGC AGGCGTTGTT GGGGCGATTG CCTTTGTGTC TGAGCCGCTG CTGCGCCGCT TAATGCCCGA AGTGCCCAAG GGACACCCCG CATTTGGCAG TATGACAATG AACTTAACGG CCAACGTGTT TGGGCTAGAT AATGCTGCAA CGCCATTGGG GCTTAAGGCA ATGCAGGATT TGCAGAGTCT TAATCCGGTC AAAACCGTCG CAACCAATGC ACAAATTCTA TTTTTAGTGC TCAATACCTC CTCGGTGACC TTAGTTCCTG TCACTGTGTT TTTGTACCGT GCCCAGCAGG GCGCCGCCGC ACCTGCGGAC ATATTTTTAC CGATTCTGCT CGCCACGTCT GCCTCAACCT TAGCGGGGCT TTTGATCGTC GCTGTTGTGC AGCGGCTTTC ACTGTTCAAT GCCGTGGTGC TCGGATATGG CGCAGTGCTG CTGTCGGCAT TAGTTGCCAG TGGTTTTTAT TTGATGACCT TAACGGCAGA TGCGATTGGC ACAGTGTCGA CCGCCTTAGG CAACGGGGTA TTGCTACTGT TAGTCTTCAG TTTTGTGCTG GTGGCTGGCG TGAGAAAAGT GGCGATTTAT GATGAGTTTA TCGAAGGCGC CAAGGCGGGG TTTAACCAAT CGATTCAACT GATCCCGTAT CTTCTAGCCA TGCTGCTGGC GATTGGTTTA CTCAGAGCGT CGGGCGCGTT AGATTACCTG CTGCAACTAA TTGCCAGTGG CGTGAGTCTT TTCGGGTTTG ATACTCGTTT TGTCGATGCA ATGCCAACCG CATTAATGAA GCCTTTTAGC GGTTCGGGCG CGCGGGCTAT GATGCTCGAA ACCATGGCGC ACCATGGGGT GGACTCCTTT GCGGGGCGCT TGGCAGCGAT TTTCCAAGGG AGCACTGAAA CAACTTTTTA TGTGCTGGCC GTTTACTTTG GCTCTGTTGG GATCCGTCAC GGGCGTCATG CGCTCGCCTG TGGTTTAACG GCCGATTTTG CAGGGATCTG CGCCGCAATT GCGGTCTGTT ATTGGTTCTA TGGCTAA
|
Protein sequence | MLNRVWLVFF LTSLLAMAVQ LFNGHIEVLA NAVEALFASA KLAAEIALGL VGVLSLWMGL MRIGEKAGVV GAIAFVSEPL LRRLMPEVPK GHPAFGSMTM NLTANVFGLD NAATPLGLKA MQDLQSLNPV KTVATNAQIL FLVLNTSSVT LVPVTVFLYR AQQGAAAPAD IFLPILLATS ASTLAGLLIV AVVQRLSLFN AVVLGYGAVL LSALVASGFY LMTLTADAIG TVSTALGNGV LLLLVFSFVL VAGVRKVAIY DEFIEGAKAG FNQSIQLIPY LLAMLLAIGL LRASGALDYL LQLIASGVSL FGFDTRFVDA MPTALMKPFS GSGARAMMLE TMAHHGVDSF AGRLAAIFQG STETTFYVLA VYFGSVGIRH GRHALACGLT ADFAGICAAI AVCYWFYG
|
| |