Gene Shewmr7_1737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1737 
Symbol 
ID4257694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2043222 
End bp2044178 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content48% 
IMG OID638122395 
ProductDNA polymerase III, delta prime subunit 
Protein accessionYP_737787 
Protein GI114047237 
COG category[L] Replication, recombination and repair 
COG ID[COG0470] ATPase involved in DNA replication 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.595933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAACGC AAAGCGGATT CGATGTATTA ACCCTGCCTT GGCTCGATGC GCCAAAACAG 
GCGTTTTTAA CCCAGTTACA CACCCAAAAA GTCCCCCACG CGCAACTCGT GGGTATCGAT
TCCGCCTATG GCGGTGAACT CTTGAGTGTG TTTATGGCGC GCGCCGCCAT GTGTTCACAA
CCCACTCCTG CGGGCGGATG CGGTTTTTGT AAGTCCTGCC AGTTATTTGA TGCGGGTAAC
CACCCCGATT TTTATCAAAT TGAGGCCGAT GGTCATCAAA TTAAAGTCGA CCAAATCCGT
GAGCTGTGTA CCCGCCTGAG TGCAACCGCC CAGCAGAGTG GTCGGCGTGT CGCCATCATT
CACCACAGTG AGCGCCTGAA CTCAGCCTCC GCCAATGCGT TACTCAAGAC GCTCGAAGAG
CCGGGCAAAG ACACTTTACT GCTATTACAT TCCGATACGC CCGCGCGTTT AATGGCAACG
ATAAGCAGTC GCTGCCAACG GCTTCCCTTT GTGGCGCCGT CTAAGATGTT GATCAAAAAC
TGGTTAATTC AGCACTGTCA GATCCAAGAG GATGTAACTT GGTGTTTGAG TGTGGTCGGC
GGCCCATTAA AGTTGGCCGA AAGTTTGCAA ACAGATGGGA CACAACCGAG TCGCTATCAA
ACTTTGTTAG GTTTTCGCAA AGATTGGGCG CAAAGTTTGT CGTCAGGCCA TCTGTGTGCT
AGTTTGTTAA CGATAAGTGA ACAACAAATC ATTGATGCTC TTAAGGTTTT ATACTTACTC
CTGAGACAAA TTTTACTGAA GTACGGCGAC CAAGATGCGT TTGTGCAAGC GCAAATAGGG
AACTTGGCGG CGAAAGTCAT GGGAATGTGT CATAGCTTAA GTGCAATGCC GAGTGTCAAT
TATTTAGGCT TGTGTCAAAG TTATGTCTTA GAATATAGAG AAATAACAAA TAAGTAA
 
Protein sequence
MVTQSGFDVL TLPWLDAPKQ AFLTQLHTQK VPHAQLVGID SAYGGELLSV FMARAAMCSQ 
PTPAGGCGFC KSCQLFDAGN HPDFYQIEAD GHQIKVDQIR ELCTRLSATA QQSGRRVAII
HHSERLNSAS ANALLKTLEE PGKDTLLLLH SDTPARLMAT ISSRCQRLPF VAPSKMLIKN
WLIQHCQIQE DVTWCLSVVG GPLKLAESLQ TDGTQPSRYQ TLLGFRKDWA QSLSSGHLCA
SLLTISEQQI IDALKVLYLL LRQILLKYGD QDAFVQAQIG NLAAKVMGMC HSLSAMPSVN
YLGLCQSYVL EYREITNK