Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1737 |
Symbol | |
ID | 4257694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2043222 |
End bp | 2044178 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638122395 |
Product | DNA polymerase III, delta prime subunit |
Protein accession | YP_737787 |
Protein GI | 114047237 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0470] ATPase involved in DNA replication |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.595933 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAACGC AAAGCGGATT CGATGTATTA ACCCTGCCTT GGCTCGATGC GCCAAAACAG GCGTTTTTAA CCCAGTTACA CACCCAAAAA GTCCCCCACG CGCAACTCGT GGGTATCGAT TCCGCCTATG GCGGTGAACT CTTGAGTGTG TTTATGGCGC GCGCCGCCAT GTGTTCACAA CCCACTCCTG CGGGCGGATG CGGTTTTTGT AAGTCCTGCC AGTTATTTGA TGCGGGTAAC CACCCCGATT TTTATCAAAT TGAGGCCGAT GGTCATCAAA TTAAAGTCGA CCAAATCCGT GAGCTGTGTA CCCGCCTGAG TGCAACCGCC CAGCAGAGTG GTCGGCGTGT CGCCATCATT CACCACAGTG AGCGCCTGAA CTCAGCCTCC GCCAATGCGT TACTCAAGAC GCTCGAAGAG CCGGGCAAAG ACACTTTACT GCTATTACAT TCCGATACGC CCGCGCGTTT AATGGCAACG ATAAGCAGTC GCTGCCAACG GCTTCCCTTT GTGGCGCCGT CTAAGATGTT GATCAAAAAC TGGTTAATTC AGCACTGTCA GATCCAAGAG GATGTAACTT GGTGTTTGAG TGTGGTCGGC GGCCCATTAA AGTTGGCCGA AAGTTTGCAA ACAGATGGGA CACAACCGAG TCGCTATCAA ACTTTGTTAG GTTTTCGCAA AGATTGGGCG CAAAGTTTGT CGTCAGGCCA TCTGTGTGCT AGTTTGTTAA CGATAAGTGA ACAACAAATC ATTGATGCTC TTAAGGTTTT ATACTTACTC CTGAGACAAA TTTTACTGAA GTACGGCGAC CAAGATGCGT TTGTGCAAGC GCAAATAGGG AACTTGGCGG CGAAAGTCAT GGGAATGTGT CATAGCTTAA GTGCAATGCC GAGTGTCAAT TATTTAGGCT TGTGTCAAAG TTATGTCTTA GAATATAGAG AAATAACAAA TAAGTAA
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Protein sequence | MVTQSGFDVL TLPWLDAPKQ AFLTQLHTQK VPHAQLVGID SAYGGELLSV FMARAAMCSQ PTPAGGCGFC KSCQLFDAGN HPDFYQIEAD GHQIKVDQIR ELCTRLSATA QQSGRRVAII HHSERLNSAS ANALLKTLEE PGKDTLLLLH SDTPARLMAT ISSRCQRLPF VAPSKMLIKN WLIQHCQIQE DVTWCLSVVG GPLKLAESLQ TDGTQPSRYQ TLLGFRKDWA QSLSSGHLCA SLLTISEQQI IDALKVLYLL LRQILLKYGD QDAFVQAQIG NLAAKVMGMC HSLSAMPSVN YLGLCQSYVL EYREITNK
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