| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1732 |
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| Symbol | |
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| ID | 4257689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2039531 |
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| End bp | 2040169 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638122390 |
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| Product | uridine kinase |
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| Protein accession | YP_737782 |
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| Protein GI | 114047232 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0572] Uridine kinase |
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| TIGRFAM ID | [TIGR00235] uridine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000414727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCTC AGCAGTGTGT CATTATTGCA ATTGCTGGCG CGTCAGCATC GGGCAAGAGT
TTAATTGCCA AGACGATTTT TGACGAACTT CGCCGCGATT TAGGCACAGA TCAGATTGGG
GTAATTAACG AAGACGCGTA CTACCGCGAT CAGAGTCATT TATCCATGGA TGAGCGTGTG
TTAACAAACT ACGACCATCC CAAAGCGTTA GACCATCAGC TGCTATGCAC GCACTTGCAG
TTGCTAAAGT CTGGCGAAGC TGTTGATATT CCTTGCTATA GCTATACCGA ACATACGCGT
ATGGCCGAAA CCGTAAAAAT GACACCGAAA AAAGTGATCA TTTTAGAAGG CATTCTGCTG
TTAACAGACC CTAAATTACG TGAATTGATG GATGCGAGCG TGTTTATGGA TACGCCGCTG
GACATTTGCT TCCTGCGCCG TTTAACCCGC GACGTGGCCG AGCGTGGCCG TACGATGGAA
TCGGTGATTT CACAGTACAA GAAGACAGTG CGTCCTATGT TCCTACAATT TATTGAACCT
TCAAAACAAT ACGCTGATAT TATCGTGCCT CGTGGTGGTA AAAACCGTAT CGCGACCGAT
ATTCTAAAGA CTCGTATTCA ACATCTACTG GCAAAATAA
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| Protein sequence | MNSQQCVIIA IAGASASGKS LIAKTIFDEL RRDLGTDQIG VINEDAYYRD QSHLSMDERV
LTNYDHPKAL DHQLLCTHLQ LLKSGEAVDI PCYSYTEHTR MAETVKMTPK KVIILEGILL
LTDPKLRELM DASVFMDTPL DICFLRRLTR DVAERGRTME SVISQYKKTV RPMFLQFIEP
SKQYADIIVP RGGKNRIATD ILKTRIQHLL AK
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