| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1730 |
|---|
| Symbol | metG |
|---|
| ID | 4257687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 2036213 |
|---|
| End bp | 2038243 |
|---|
| Gene Length | 2031 bp |
|---|
| Protein Length | 676 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638122388 |
|---|
| Product | methionyl-tRNA synthetase |
|---|
| Protein accession | YP_737780 |
|---|
| Protein GI | 114047230 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000858186 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACTT CACAACGTAA AATTCTCGTG ACCAGCGCAC TTCCCTACGC GAACGGACCG
ATTCATTTAG GTCACATGCT GGAATACATC CAGACGGATA TCTGGTCGCG TTATCAAAAA
CTTCGTGGAC ATGAGTGCCA CTATATTTGT GCCGATGACG CCCACGGCAC ACCGATTATG
CTCAAGGCGC AACAATTAGG CATGGCGCCT GAAGAAATGA TCGCGCAAGT CAACAAAGAG
CATCAGCAGG ATTTCGCCGA TTTTAATATC GCCTTCGATA ATTATCACAG CACCCACAGT
GAAGAAAACC GCGTGCTGGC GAGCGATATT TACTTAAAGC TACGTGCTAA CGGCTATATC
AAGAGCAAGA GCATTTCGCA ATTATTTGAC CCTGAAAAGT CGATGTTCCT GCCAGACCGC
TTCGTAAAAG GCACCTGTCC TAAGTGTAAA TCACCGGATC AATACGGCGA CAACTGTGAT
GCCTGCGGCG CAACTTACAG CCCAACTGAG CTGATTAATC CTAAGTCGGC CGTCTCTGGC
GCGACACCTG TAATGAAGGA CACTGAGCAC TTCTTCTTCG ACTTACCCGC TTTCGAAGAC
ATGCTCAAAG AGTGGACTCG CTCGGGTGCA CTGCAAACCG AAATGGCCAA CAAACTCGAT
GAATGGTTCG AACAGGGTCT GCAGCAATGG GACATCACCC GCGATGCGCC TTACTTTGGT
TTTGAGATCC CTGATGCACC GGGCAAATAC TTCTACGTAT GGTTAGATGC GCCTATCGGC
TACATGGGCT CATTCAAAAA CCTCTGTGAC AAACGCCCAG AGCTGAGCTT CGACGAATTT
TGGGCCAAGG ATTCTAAGGC CGAGGTTTAC CACTTTATCG GTAAAGACAT CGTTTACTTC
CACAGCCTGT TCTGGCCCGC CATGCTCCAT GGCTCGGGCT ACCGTCAACC TAACAGTGTC
TACGCCCACG GTTATGTCAC AGTAAACGGC GCTAAGATGT CTAAATCTAA GGGCACCTTT
ATTAAGGCGC GCACCTATTT AGACCACTTA GATCCTGAAT ATTTACGCTA CTACTACGCG
GCCAAACTCA GTAGCCGTAT CGACGATTTA GATTTAAATC TGGAAGATTT CGCCCAGCGC
GTGAATTCAG ATCTAGTTGG TAAGCTAGTG AACTTAGCCT CGCGCACCGC AGGTTTTATC
ACTAAGCGTT TCGATGGCAA GTTGGCCAAG ATTGCCGACA CCACACTCAC GGATGCATTT
TTAGCGAAAC AAGAGCAAAT CGCCGAGTTT TATGAAACCC GCGAATACGG TAAAGCGATG
CGCGAAATCA TGGCGCTAGC CGATATCGCC AACGGTTTTG TCGCCGATGC GGCGCCTTGG
CAGTTAGTGA AGCAAGACGA TCAACAGGAA GCCGCGCACC AAGTGTGCTC GAACGCCCTG
AACCTGTTCC GTATTCTGGT CACTTACTTA AAACCTGTGT TGCCACGTTT AGCGCTGGAT
GTTGAAGCCT TCTTCCAACA GACCTTAACT TGGGATAGCT TAGGCCAAGA TATGGCAGGA
CACGAAATTG CACCATTCAA AGCCATGATG CAACGTGTTG AATTAGACAA GGTTAACGCT
ATGGTGGCCG ACTCTAAAGA AAACCTGCAA GCCACGAGCG AGCCTGAAGC GCCTAAGGGC
CCATTGGCGA GCGATCCGAT TAGCGACACC ATCAACTATG AAGATTTCGC TAAAATCGAT
CTGCGTATTG CGCGTATCGT TAAAGCCGAG CATGTAGCCG AAGCCGACAA ACTGTTAAAA
CTGCAATTGG ATATCGGCGG CGAAACCCGT CAGGTATTTG CGGGCATTAA ATCGGCCTAC
TCGCCTGAAG ATCTCGAAGG TAAGTTGACT GTGATGGTCG CCAACCTTGC GCCACGTAAG
ATGCGTTTTG GCATGTCAGA AGGCATGGTT CTGGCAGCAG GCCCAGGTGG CAGCGATTTG
TGGATTTTAG AACCCCATGA AGGCGCACAA CCAGGCATGC GTGTGAAGTA A
|
|---|
| Protein sequence | MATSQRKILV TSALPYANGP IHLGHMLEYI QTDIWSRYQK LRGHECHYIC ADDAHGTPIM
LKAQQLGMAP EEMIAQVNKE HQQDFADFNI AFDNYHSTHS EENRVLASDI YLKLRANGYI
KSKSISQLFD PEKSMFLPDR FVKGTCPKCK SPDQYGDNCD ACGATYSPTE LINPKSAVSG
ATPVMKDTEH FFFDLPAFED MLKEWTRSGA LQTEMANKLD EWFEQGLQQW DITRDAPYFG
FEIPDAPGKY FYVWLDAPIG YMGSFKNLCD KRPELSFDEF WAKDSKAEVY HFIGKDIVYF
HSLFWPAMLH GSGYRQPNSV YAHGYVTVNG AKMSKSKGTF IKARTYLDHL DPEYLRYYYA
AKLSSRIDDL DLNLEDFAQR VNSDLVGKLV NLASRTAGFI TKRFDGKLAK IADTTLTDAF
LAKQEQIAEF YETREYGKAM REIMALADIA NGFVADAAPW QLVKQDDQQE AAHQVCSNAL
NLFRILVTYL KPVLPRLALD VEAFFQQTLT WDSLGQDMAG HEIAPFKAMM QRVELDKVNA
MVADSKENLQ ATSEPEAPKG PLASDPISDT INYEDFAKID LRIARIVKAE HVAEADKLLK
LQLDIGGETR QVFAGIKSAY SPEDLEGKLT VMVANLAPRK MRFGMSEGMV LAAGPGGSDL
WILEPHEGAQ PGMRVK
|
|---|
| |