Gene Shewmr7_1728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1728 
Symbol 
ID4257685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2034214 
End bp2034966 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content51% 
IMG OID638122386 
Producthypothetical protein 
Protein accessionYP_737778 
Protein GI114047228 
COG category[S] Function unknown 
COG ID[COG0327] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00486] dinuclear metal center protein, YbgI/SA1388 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000970699 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGGA CAGAACTAAC CCAATATTTA GCCGATTTTT TGCGCGTATC GGCATTTAAA 
GATTACGCTC CCAATGGTTT GCAGGTTGAA GGTAAAGCAG AGATCCGCAC CATAGTGACA
GGTGTTACTG CGTCCCAAGC GTTAATCGAT GAAGCGATTC GCCTCAAAGC CGATGCGATT
TTGGTTCACC ATGGCTTTTT CTGGAAGAGT GAACCAGAGG TGATCATCGG CATGAAACAA
CGCCGGATCA AAGCGTTACT CGCCCACGAT ATCAACCTAT TTGGTTACCA CTTACCCTTA
GATGCTCACC CTATGTTGGG CAATAATGCT ACGCTTGGCC GTAAACTTGG GATCTTAGAT
GCCGAATCTG TCGAAGATGT AGCACAGGGG CTCGTGTGGC GCGGCAAACT GGATTTACCT
GTCAGTGCCA GTGAATTTGC CGCGACCTTA GACGAAGTAC TTGGCAGAAC ACCGCTGCAT
ATTGGCGAGA GTTCGGATGA AATCCAATAC TTAGCTTGGT GCACGGGCGG TGCGCAGGAT
TATATCGATG TTGCCGCAAG CCTTGGGGTC GATGCGTTTA TCAGTGGTGA AGTGTCTGAG
CGGACGTTCC ACAGCGCGGT GGAGCAGGGT ATTCACTATT ATGCGGCGGG TCACCATGCG
ACCGAGCGTT TTGGCATTGA GGCGCTGGGG CGTCATCTCG CCCGCGAATT CAATTTAGTG
CACCATTTTG TGGATATCGC TAACCCTGTC TAA
 
Protein sequence
MTRTELTQYL ADFLRVSAFK DYAPNGLQVE GKAEIRTIVT GVTASQALID EAIRLKADAI 
LVHHGFFWKS EPEVIIGMKQ RRIKALLAHD INLFGYHLPL DAHPMLGNNA TLGRKLGILD
AESVEDVAQG LVWRGKLDLP VSASEFAATL DEVLGRTPLH IGESSDEIQY LAWCTGGAQD
YIDVAASLGV DAFISGEVSE RTFHSAVEQG IHYYAAGHHA TERFGIEALG RHLAREFNLV
HHFVDIANPV