Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1721 |
Symbol | |
ID | 4256562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2028787 |
End bp | 2028993 |
Gene Length | 207 bp |
Protein Length | 68 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638122379 |
Product | cold-shock DNA-binding protein family protein |
Protein accession | YP_737771 |
Protein GI | 114047221 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000154262 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGCG GAACTGTTAA ATGGTTCAAC AACGCCAAAG GATTCGGGTT TATTTGCCCT GATCAAGGTG GCGAGGACGT TTTTGCACAC TATTCTACCA TTGAAATGGA AGGCTATAGA ACTCTAAAAG CAGGCCAACC AGTTCAATTC GAAGTAGAAC AGGGTCCAAA AGGAATGCAC GCTTCAGCCA TTTCACCAAC AAAATAA
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Protein sequence | MASGTVKWFN NAKGFGFICP DQGGEDVFAH YSTIEMEGYR TLKAGQPVQF EVEQGPKGMH ASAISPTK
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